DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and Bhlhe23

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001102681.1 Gene:Bhlhe23 / 499952 RGDID:1559760 Length:223 Species:Rattus norvegicus


Alignment Length:196 Identity:56/196 - (28%)
Similarity:80/196 - (40%) Gaps:52/196 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LTQLPPVSGQDY------------GQGAFLSPEWQFLDAAGGTQTEL---------GPIMEAQGQ 68
            :.:|..:||..|            ...|...||......|.|...:|         ...:|:.|:
  Rat     1 MAELKSLSGDSYLALSHGYAATSHAYAAARGPETTRGFGASGPGGDLPAAPASRVPAATVESSGE 65

  Fly    69 HTQPQ------TKRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERLR 127
            .:..:      .:||.......|.|:...||.:|        |.:.|||||:||:.||.|.:.||
  Rat    66 QSGDEDEAFERRRRRRGPGVAVDARRRPREQRSL--------RLSINARERRRMHDLNDALDGLR 122

  Fly   128 EVVP---APSIDQKLSKFETLQMAQSYIL----------ALCDLLNNGD---VEVDAAAYTIFGD 176
            .|:|   :||: :||||..||.:|::|||          .|...||.|.   ..|.||..|.||.
  Rat   123 AVIPYAHSPSV-RKLSKIATLLLAKNYILMQAQALEEMRRLVAYLNQGQSLAAPVAAAPLTPFGQ 186

  Fly   177 S 177
            :
  Rat   187 A 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 28/67 (42%)
Bhlhe23NP_001102681.1 bHLH_TS_bHLHe22_bHLHb5 99..168 CDD:381524 30/77 (39%)

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