DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cato and Fer2

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster


Alignment Length:91 Identity:31/91 - (34%)
Similarity:48/91 - (52%) Gaps:23/91 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 KRRRQAANARERKRMN----------GLNAAFERLREVVPAPSIDQKLSKFETLQMAQSYILALC 156
            |.:|||||.|||||:.          .:|:||:.||..||....:::|||.:||::|.:||..|.
  Fly   146 KMQRQAANVRERKRIQRSAPTGYTKCSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLR 210

  Fly   157 DLLN-------------NGDVEVDAA 169
            ::|.             .|:::.|.|
  Fly   211 EVLQTDYDPLTYVEKCLRGEIKADRA 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 26/64 (41%)
Fer2NP_001287359.1 bHLH_SF 144..216 CDD:469605 28/69 (41%)

Return to query results.
Submit another query.