DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cato and sage

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster


Alignment Length:186 Identity:53/186 - (28%)
Similarity:81/186 - (43%) Gaps:29/186 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EEDGSSQYLGSPNYNLTQLP-PVSGQDYGQGAFLSPEWQFLDAAGGTQTELGP---IMEAQGQHT 70
            |::..:..|..|.|::  :| |||....||.|..||    :.......:||.|   .|...|...
  Fly    95 EKEAHNMGLLPPTYSV--IPQPVSMWHAGQVATGSP----VGLECNKPSELVPPPMYMSYSGGSI 153

  Fly    71 QPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERLREVVPAPSI 135
                   :||......::.:|.....:..::|..|:.|..|||.||..:|.||:.||..:|....
  Fly   154 -------ANSTEVDIAKEHNPAWREKALQMEKDYRRTACDRERTRMRDMNRAFDLLRSKLPISKP 211

  Fly   136 D-QKLSKFETLQMAQSYILALCDLLNNGDVEVDAAAYTIFGDSDSG-FGLSGGSLS 189
            : :|.||.|:|::|.:||..|..:|....|          |.:.:| ...||||.|
  Fly   212 NGKKYSKIESLRIAINYINHLQAMLRESSV----------GQNGNGCCAWSGGSSS 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 22/55 (40%)
sageNP_524287.1 bHLH_TS 181..236 CDD:381396 22/54 (41%)

Return to query results.
Submit another query.