DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and Bhlhe22

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001102410.1 Gene:Bhlhe22 / 365748 RGDID:1305451 Length:352 Species:Rattus norvegicus


Alignment Length:213 Identity:60/213 - (28%)
Similarity:89/213 - (41%) Gaps:74/213 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GSSQYLGSPNYNLTQLPPVS------GQDYGQGAFLSPEWQFLDAAGGTQT---------ELGPI 62
            ||:...|.|  :|:.||..:      |:..|:|:       ..:::||.|:         ||  :
  Rat    98 GSAGVGGEP--SLSSLPAGAALCLKYGESAGRGS-------VAESSGGEQSPDDDSDGRCEL--V 151

  Fly    63 MEAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNL-----------SPT----------------V 100
            :.|.|...      |::...||.|.|.:...:|.           .||                .
  Rat   152 LRAGGPDP------RASPGAGSGGAKVAEGCSNAHLHGGSGLPPGGPTSGSGGNGGGGSSKKSKE 210

  Fly   101 QKRRRQAANARERKRMNGLNAAFERLREVVP---APSIDQKLSKFETLQMAQSYIL--------- 153
            ||..|...|||||:||:.||.|.:.||.|:|   :||: :||||..||.:|::|||         
  Rat   211 QKALRLNINARERRRMHDLNDALDELRAVIPYAHSPSV-RKLSKIATLLLAKNYILMQAQALEEM 274

  Fly   154 -ALCDLLNNGDVEVDAAA 170
             .|...||.|.. :.||:
  Rat   275 RRLVAYLNQGQA-ISAAS 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 28/67 (42%)
Bhlhe22NP_001102410.1 bHLH_TS_bHLHe22_bHLHb5 214..283 CDD:381524 29/69 (42%)

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