DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cato and LOC3290329

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_061505703.1 Gene:LOC3290329 / 3290329 VectorBaseID:AGAMI1_014996 Length:225 Species:Anopheles gambiae


Alignment Length:94 Identity:35/94 - (37%)
Similarity:51/94 - (54%) Gaps:21/94 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 RKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERLREVVP------------------AP 133
            |:..|..:.:...|   :|:.||.|||.||:|||.|.:|||..||                  .|
Mosquito    19 RRKLPSGSGVLSLV---KRKKANQRERNRMHGLNDALDRLRMCVPLPASLTTATVRPDDAREATP 80

  Fly   134 SIDQKLSKFETLQMAQSYILALCDLLNNG 162
            :..|||||.:||::||:||..|.::|::|
Mosquito    81 TPPQKLSKIDTLRLAQNYIAVLLEVLHSG 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 30/72 (42%)
LOC3290329XP_061505703.1 None

Return to query results.
Submit another query.