DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and olig2

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_835201.1 Gene:olig2 / 325288 ZFINID:ZDB-GENE-030131-4013 Length:273 Species:Danio rerio


Alignment Length:157 Identity:51/157 - (32%)
Similarity:74/157 - (47%) Gaps:24/157 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GQGAFLSPEWQ---FLDAAGGTQTELGPIMEAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSP 98
            |...|||...:   |..|...||::..|  |.:|...:..:....:|....  ..|..::..||.
Zfish    17 GDDLFLSAVKKSVGFSGAVSSTQSDSPP--ELRGADMRGISSAEEDSMALK--MLSKKDRKLLSE 77

  Fly    99 TVQKRRRQAANARERKRMNGLNAAFERLREVVP---APSIDQKLSKFETLQMAQSYILALCDLLN 160
            ...:..|...|:||||||:.||.|.:.||||:|   .||: :||||..||.:|::|||    :|:
Zfish    78 NELQSMRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSV-RKLSKIATLLLARNYIL----MLS 137

  Fly   161 NGDVEVDAAAYTIFGDSDSGFGLSGGS 187
            |...|:......|:|         |||
Zfish   138 NSLEEMKRLVSEIYG---------GGS 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 28/57 (49%)
olig2NP_835201.1 bHLH_TS_OLIG2 69..151 CDD:381510 33/86 (38%)

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