DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and olig4

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_955808.1 Gene:olig4 / 324857 ZFINID:ZDB-GENE-030131-3580 Length:244 Species:Danio rerio


Alignment Length:111 Identity:39/111 - (35%)
Similarity:59/111 - (53%) Gaps:15/111 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IMEAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERL 126
            :.:|.|:..|.::::      |......:..:.:||....:..|...|:||||||:.||.|.:.|
Zfish    28 MFQAYGETVQQKSEK------GLQNAGKTRTRADLSKDDLQDLRLKVNSRERKRMHDLNQAMDGL 86

  Fly   127 REVVP---APSIDQKLSKFETLQMAQSYILALCDLLNN-----GDV 164
            |||:|   .||: :||||..||.:|::|||.|...|..     |||
Zfish    87 REVMPYAQGPSV-RKLSKISTLLLARNYILMLSSSLEEMKKLVGDV 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 29/57 (51%)
olig4NP_955808.1 bHLH_TS_OLIG2_like 64..126 CDD:381568 30/62 (48%)

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