Protein Alignment cato and HLH4C

DIOPT Version :10

• Sequence 1: NP_477344.1
• Gene: cato / 36813
• FlyBaseID: FBgn0024249
• Length: 189
• Species: Drosophila melanogaster
• Sequence 2: NP_001259243.1
• Gene: HLH4C / 31397
• FlyBaseID: FBgn0011277
• Length: 191
• Species: Drosophila melanogaster
• Alignment Length: 184
• Identity: 53/184 - (28%)
• Similarity: 79/184 - (42%)
• Gaps: 29/184 - (15%)

  Fly     1 MSYYYSSASEEDGSSQYLGSPNYNLTQLPPVSGQDYGQGAFLSPEWQFLDAAGGTQTELGPIMEA 65
            :|.||....:|     .:|..|      |.:..:||.....|..:.:| .|....:|...|   |
  Fly    18 LSRYYLVDDDE-----MIGPNN------PHLVNEDYAASTTLDIDKRF-QARMACETAAQP---A 67

  Fly    66 QGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQA------ANA-RERKRMNGLNAAF 123
            ......|..:||:......|    ..|...||...::|||:|      |:| |||.|:...|.:|
  Fly    68 PPPPPTPAPRRRTTPIAHLD----PSELVGLSREERRRRRRATLKYRTAHATRERIRVEAFNVSF 128

  Fly   124 ERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNGDVEVDAAAYTIFGDS 177
            ..||:::|....|:||||.|.|::|..||..|..:|   :.. |:|..:.|..|
  Fly   129 AELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVL---ETPXDSAGASSFATS 179

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cato	NP_477344.1	bHLH_TS_ATOH1_like	104..159	CDD:381436	25/61 (41%)
HLH4C	NP_001259243.1	bHLH_TS_HEN1	105..165	CDD:381544	24/62 (39%)