DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and Tal1

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_063143802.1 Gene:Tal1 / 313507 RGDID:1306748 Length:335 Species:Rattus norvegicus


Alignment Length:130 Identity:42/130 - (32%)
Similarity:58/130 - (44%) Gaps:16/130 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 TQPQTKRRSNSFTGSDG-----------RKSSPEQTNLS--PTVQKRRRQAANARERKRMNGLNA 121
            :||.....|..|...|.           |:.||.:..::  |..:..||...|:|||.|...:|.
  Rat   147 SQPLASLGSGFFGEPDAFPMFTNNNRVKRRPSPYEMEITDGPHTKVVRRIFTNSRERWRQQNVNG 211

  Fly   122 AFERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNGDVEVDAAAYTIFGDSDSGFGLSGG 186
            ||..||:::|....|:||||.|.|::|..||..|..|||:.:.|....|..   ..|...|..||
  Rat   212 AFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQEEEGTQRAKP---GKDPMVGAGGG 273

  Fly   187  186
              Rat   274  273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 24/54 (44%)
Tal1XP_063143802.1 None

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