DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and ac

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster


Alignment Length:190 Identity:35/190 - (18%)
Similarity:63/190 - (33%) Gaps:68/190 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 VQEVGKVSEKEVEKVVEKEVEKEQEKVTEKEQEKV------VEKEVEKEVEKDAEKEAQKVEIES 374
            :.|||   :|.:::.| ..:|.....::|:..:.|      :||:.::|||.....|...|::..
  Fly   187 IYEVG---QKGIQRRV-AAIENGTHVLSEEGDDFVDAFIIKIEKDSKEEVESTFTLETLAVDLFD 247

  Fly   375 NGSVVDATVDTTT----------P------KKEVSEPAAAATAGGVNSAESANHENA-------- 415
            .......|..||.          |      :.|::|     ..||:.|...|:..:.        
  Fly   248 LWVAGQETTSTTLCWAFVCLMNYPEVVEKLRNELTE-----VTGGMRSVSLADRSSTLYLNATIN 307

  Fly   416 ---------KESTPKKASDDEVTETVDASKAPAES-----------------NEKVTNPE 449
                     ..:.|:...:|.:   :|....||.:                 |.|..|||
  Fly   308 EIQRIASILNVNLPRVLEEDAL---IDGVLVPAGTAFATQLSAMHTDDETFKNHKEFNPE 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436
acNP_476824.1 bHLH_TS_dAS-C_like 25..94 CDD:381587
Blue background indicates that the domain is not in the aligned region.

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