DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and ascl1b

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_571306.1 Gene:ascl1b / 30478 ZFINID:ZDB-GENE-980526-174 Length:195 Species:Danio rerio


Alignment Length:89 Identity:33/89 - (37%)
Similarity:47/89 - (52%) Gaps:12/89 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 RKSSPEQ---------TNLSPTVQKRRRQAA---NARERKRMNGLNAAFERLREVVPAPSIDQKL 139
            |.||||.         ..|..|:.:::..|.   |.|||.|:..:|..|:.||:.||..:.::|:
Zfish    38 RSSSPELLRCKRRLTFNGLGYTIPQQQPMAVARRNERERNRVKQVNMGFQTLRQHVPNGAANKKM 102

  Fly   140 SKFETLQMAQSYILALCDLLNNGD 163
            ||.|||:.|..||.||..||:..|
Zfish   103 SKVETLRSAVEYIRALQQLLDEHD 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 23/57 (40%)
ascl1bNP_571306.1 bHLH_SF 63..133 CDD:469605 26/64 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 141..164
Blue background indicates that the domain is not in the aligned region.

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