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Protein Alignment cato and atoh1a
DIOPT Version :9
Sequence 1: | NP_477344.1 |
Gene: | cato / 36813 |
FlyBaseID: | FBgn0024249 |
Length: | 189 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571166.2 |
Gene: | atoh1a / 30303 |
ZFINID: | ZDB-GENE-990415-17 |
Length: | 292 |
Species: | Danio rerio |
Alignment Length: | 143 |
Identity: | 61/143 - (42%) |
Similarity: | 80/143 - (55%) |
Gaps: | 18/143 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 AFLSPEWQFLDAAGGTQTELGPIMEAQGQHTQPQTKRRSNS------------FTGSD-GRKSSP 91
|:|:|......||........|...|:|..:....::.|.| ..|:| ||:.:|
Zfish 43 AWLAPVQAGTCAAHAEYLLHSPGSSAEGVSSASNFRKSSKSPVKVRELCRLKGAVGADEGRQRAP 107
Fly 92 --EQTNLSPTVQKRRRQAANARERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQSYILA 154
:.||: |||:||.|||||||:||:|||.||:.||.|:||...|:||||:|||||||.||.|
Zfish 108 SSKSTNV---VQKQRRMAANARERRRMHGLNHAFDELRSVIPAFDNDKKLSKYETLQMAQIYINA 169
Fly 155 LCDLLNNGDVEVD 167
|.|||.....:.|
Zfish 170 LSDLLQGPGAKAD 182
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
cato | NP_477344.1 |
HLH |
104..155 |
CDD:278439 |
35/50 (70%) |
atoh1a | NP_571166.2 |
HLH |
117..175 |
CDD:238036 |
40/57 (70%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4395 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm26616 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR19290 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2611 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X4691 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
7 | 6.900 |
|
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