DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and neurod1

DIOPT Version :9

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_571053.1 Gene:neurod1 / 30169 ZFINID:ZDB-GENE-990415-172 Length:350 Species:Danio rerio


Alignment Length:102 Identity:45/102 - (44%)
Similarity:60/102 - (58%) Gaps:17/102 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 EAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKR---RRQAANARERKRMNGLNAAFER 125
            |..|..|:|  |||            .|::..::....:|   ||..||||||.||:|||.|.|.
Zfish    68 EEDGDDTKP--KRR------------GPKKKKMTKARMQRFKMRRMKANARERNRMHGLNDALES 118

  Fly   126 LREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNG 162
            ||:|||..|..|||||.|||::|::||.||.::|.:|
Zfish   119 LRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSG 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 HLH 104..155 CDD:278439 32/50 (64%)
neurod1NP_571053.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..91 8/36 (22%)
Nuclear localization signal. /evidence=ECO:0000255 82..88 0/5 (0%)
HLH 95..153 CDD:238036 34/57 (60%)
Neuro_bHLH 155..277 CDD:289310 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2611
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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