DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and Neurog1

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_062080.1 Gene:Neurog1 / 29410 RGDID:3167 Length:244 Species:Rattus norvegicus


Alignment Length:169 Identity:54/169 - (31%)
Similarity:72/169 - (42%) Gaps:42/169 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SGQDYGQGAFLSPEWQFLDAAGGTQTELGPIMEAQG-----QHTQPQTKRRSNSFTGSD------ 85
            ||.|.  .:||:.|   .|.|     .|.|:....|     :.:.|.....||...|.|      
  Rat    19 SGSDL--SSFLTDE---EDCA-----RLQPLASTSGLSVPARRSAPTLSGASNVPGGQDEEQERR 73

  Fly    86 ---GRKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQM 147
               ||.....:. |..::::.||..||.|||.||:.||||.:.||.|:|:...|.||:|.|||:.
  Rat    74 RRRGRARVRSEA-LLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRF 137

  Fly   148 AQSYILALCDLLNNGDVEVDAAAYTIFGDSDSGFGLSGG 186
            |.:||.||.:.|...|.                 ||.||
  Rat   138 AYNYIWALAETLRLADQ-----------------GLPGG 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 29/54 (54%)
Neurog1NP_062080.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..84 8/40 (20%)
bHLH_TS_NGN1_NeuroD3 83..154 CDD:381559 31/71 (44%)

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