DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and neurod4

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_739568.2 Gene:neurod4 / 266958 ZFINID:ZDB-GENE-030730-1 Length:348 Species:Danio rerio


Alignment Length:110 Identity:44/110 - (40%)
Similarity:65/110 - (59%) Gaps:8/110 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GPIMEAQGQHTQPQTKRRSNSFTGSDGRKS----SPEQTNLSPTVQKR---RRQAANARERKRMN 117
            || :|...:....:.:...:...|.||.|:    .|::..::...|:|   ||..||||||.||:
Zfish    48 GP-LEIGSEDMDEEEEEEEDEEMGLDGEKAPKRRGPKKKKMTKARQERFRARRIKANARERSRMH 111

  Fly   118 GLNAAFERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNG 162
            |||.|.:.||.|:|..|..|||||.|||::|::||.||.::|.:|
Zfish   112 GLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLESG 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 32/54 (59%)
neurod4NP_739568.2 bHLH_TS_NeuroD4_ATOH3 70..155 CDD:381564 40/84 (48%)
Neuro_bHLH 156..272 CDD:463621 1/1 (100%)

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