DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and PTF1A

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_835455.1 Gene:PTF1A / 256297 HGNCID:23734 Length:328 Species:Homo sapiens


Alignment Length:191 Identity:54/191 - (28%)
Similarity:79/191 - (41%) Gaps:32/191 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DGSSQYL--GSPNYNLTQLPPVSG-----QDYGQGAFL----SPEWQFLDAAGGTQTEL-----G 60
            ||:...|  ..|...|...||.||     .|.|.|.:.    :|...|..:.|...:.|     |
Human    64 DGACLLLQPAPPAAPLALAPPSSGGLGEPDDGGGGGYCCETGAPPGGFPYSPGSPPSCLAYPCAG 128

  Fly    61 PIMEAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFER 125
            ..:.:.|        .|....:|:....:...:...|....::.|||||.|||:||..:|.|||.
Human   129 AAVLSPG--------ARLRGLSGAAAAAARRRRRVRSEAELQQLRQAANVRERRRMQSINDAFEG 185

  Fly   126 LREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNGDVEVDAAAYTIFGDSDSGFGLSGG 186
            ||..:|....:::|||.:||::|..||..|.:|:.        |...:.|....|.|..||
Human   186 LRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQ--------ADLPLRGGGAGGCGGPGG 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 26/54 (48%)
PTF1ANP_835455.1 bHLH_TS_PTF1A 165..219 CDD:381423 26/53 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..278
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..328
Blue background indicates that the domain is not in the aligned region.

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