DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and Ascl2

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_113691.1 Gene:Ascl2 / 24209 RGDID:2159 Length:260 Species:Rattus norvegicus


Alignment Length:116 Identity:43/116 - (37%)
Similarity:52/116 - (44%) Gaps:31/116 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 RKSSPEQTNLSPTVQKRRRQAA-------------NARERKRMNGLNAAFERLREVVPAPSIDQK 138
            |..|||....|    :|||..|             |.|||.|:..:|..|:.||:.||....::|
  Rat    93 RPPSPELLRCS----RRRRSGATEASSSSAAVARRNERERNRVKLVNLGFQALRQHVPHGGANKK 153

  Fly   139 LSKFETLQMAQSYILALCDLLNNGDVEVDAAAYTIFGDSDSGFGLSGGSLS 189
            |||.|||:.|..||.||..||...|. |.||             ||||.|:
  Rat   154 LSKVETLRSAVEYIRALQRLLAEHDA-VRAA-------------LSGGLLT 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 26/67 (39%)
Ascl2NP_113691.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..126 10/36 (28%)
bHLH_TS_ASCL2_Mash2 128..180 CDD:381586 23/52 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..239 43/116 (37%)

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