DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and Twist1

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_035788.1 Gene:Twist1 / 22160 MGIID:98872 Length:206 Species:Mus musculus


Alignment Length:140 Identity:43/140 - (30%)
Similarity:62/140 - (44%) Gaps:26/140 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 AAGGTQTELGPIMEAQGQHTQP----QTKRRSNSFTGSDGRKS---------------SPEQTNL 96
            :|||:....|......|...:|    |.||...|..|..|..:               ||:....
Mouse    45 SAGGSAGPGGATGGGIGGGDEPGSPAQGKRGKKSAGGGGGGGAGGGGGGGGGSSSGGGSPQSYEE 109

  Fly    97 SPTVQKRRRQAANARERKRMNGLNAAFERLREVVPA-PSIDQKLSKFETLQMAQSYILALCDLLN 160
            ..|    :|..||.|||:|...||.||..||:::|. ||  .||||.:||::|..||..|..:|.
Mouse   110 LQT----QRVMANVRERQRTQSLNEAFAALRKIIPTLPS--DKLSKIQTLKLAARYIDFLYQVLQ 168

  Fly   161 NGDVEVDAAA 170
            :.:::...|:
Mouse   169 SDELDSKMAS 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 26/55 (47%)
Twist1NP_035788.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..109 14/63 (22%)
bHLH_TS_TWIST1 102..178 CDD:381418 30/81 (37%)
Sufficient for transactivation activity 165..195 2/14 (14%)

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