DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and hlh-17

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_502928.3 Gene:hlh-17 / 185460 WormBaseID:WBGene00001961 Length:101 Species:Caenorhabditis elegans


Alignment Length:52 Identity:23/52 - (44%)
Similarity:34/52 - (65%) Gaps:4/52 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 RQAANARERKRMNGLNAAFERLREVVP---APSIDQKLSKFETLQMAQSYIL 153
            |.:.|.|||.||:.||.|.:.||.|:|   ..|: :||||..||.:|:::|:
 Worm    16 RLSINLRERCRMHDLNEALDDLRAVIPYAHGGSV-RKLSKIATLLLAKNHII 66

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 23/52 (44%)
hlh-17NP_502928.3 bHLH_TS_bHLHe22_like 16..76 CDD:381474 23/52 (44%)

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