DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and hlh-16

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_492372.2 Gene:hlh-16 / 183973 WormBaseID:WBGene00001960 Length:146 Species:Caenorhabditis elegans


Alignment Length:124 Identity:38/124 - (30%)
Similarity:59/124 - (47%) Gaps:26/124 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GTQTELGPIMEAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQAANARERKRMNG 118
            |.:.|..|.:            ||..|..|  |||   :...|:...|...|.:.|:|||:||:.
 Worm     8 GAEEEFEPYV------------RRKRSEAG--GRK---KMQGLNEQEQNLLRNSINSRERRRMHE 55

  Fly   119 LNAAFERLREVVPAP--SIDQKLSKFETLQMAQSYILALCDL-------LNNGDVEVDA 168
            ||..||.|||.:|.|  :..:::||..||.:|.::|..|.:.       ||..:.::|:
 Worm    56 LNDEFETLRECLPYPNEANSRRMSKANTLLLASNWIKQLANANHKLQMELNMANAKIDS 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 23/63 (37%)
hlh-16NP_492372.2 bHLH_TS 42..96 CDD:381396 23/53 (43%)

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