DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and hlh-15

DIOPT Version :9

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_508440.1 Gene:hlh-15 / 183427 WormBaseID:WBGene00001959 Length:89 Species:Caenorhabditis elegans


Alignment Length:98 Identity:31/98 - (31%)
Similarity:50/98 - (51%) Gaps:11/98 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IMEAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERL 126
            :||..|..|..:..|:.:.......|:::|:..||..|           |||.|:...|.||.:|
 Worm     2 LMEDGGLDTTSEEYRKLSKAERRKRRRATPKYRNLHAT-----------RERIRVESFNMAFSQL 55

  Fly   127 REVVPAPSIDQKLSKFETLQMAQSYILALCDLL 159
            |.::|...:::||||.|.|:.:.:||..|.:||
 Worm    56 RALLPTLPVEKKLSKIEILRFSIAYISFLDNLL 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 HLH 104..155 CDD:278439 18/50 (36%)
hlh-15NP_508440.1 bHLH_TS_HEN 32..88 CDD:381420 22/66 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 47 1.000 Inparanoid score I4131
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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