DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and hlh-15

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_508440.1 Gene:hlh-15 / 183427 WormBaseID:WBGene00001959 Length:89 Species:Caenorhabditis elegans


Alignment Length:98 Identity:31/98 - (31%)
Similarity:50/98 - (51%) Gaps:11/98 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IMEAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERL 126
            :||..|..|..:..|:.:.......|:::|:..||..|           |||.|:...|.||.:|
 Worm     2 LMEDGGLDTTSEEYRKLSKAERRKRRRATPKYRNLHAT-----------RERIRVESFNMAFSQL 55

  Fly   127 REVVPAPSIDQKLSKFETLQMAQSYILALCDLL 159
            |.::|...:::||||.|.|:.:.:||..|.:||
 Worm    56 RALLPTLPVEKKLSKIEILRFSIAYISFLDNLL 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 19/54 (35%)
hlh-15NP_508440.1 bHLH_TS_HEN 32..88 CDD:381420 22/66 (33%)

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