DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and hlh-8

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_509367.1 Gene:hlh-8 / 181069 WormBaseID:WBGene00001953 Length:178 Species:Caenorhabditis elegans


Alignment Length:97 Identity:34/97 - (35%)
Similarity:50/97 - (51%) Gaps:13/97 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 RKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQSY 151
            ||:..|..        ::|..||.|||:|...||.||..||:::|:...| |:||..||::|..|
 Worm    12 RKNEVENV--------QQRACANRRERQRTKELNDAFTLLRKLIPSMPSD-KMSKIHTLRIATDY 67

  Fly   152 ILALCDLLNNGDVEVDAAAYTIFGDSDSGFGL 183
            |..|.::..||   .....::|| |...|:.|
 Worm    68 ISFLDEMQKNG---CKLYGHSIF-DEKRGYNL 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 24/54 (44%)
hlh-8NP_509367.1 bHLH_TS_TWIST 21..79 CDD:381470 26/61 (43%)

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