DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and Nhlh2

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_848892.1 Gene:Nhlh2 / 18072 MGIID:97324 Length:135 Species:Mus musculus


Alignment Length:142 Identity:44/142 - (30%)
Similarity:64/142 - (45%) Gaps:35/142 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DYGQGAFLSPEWQFLDAAGGTQT-------ELGPIMEAQGQHTQPQTKRRSNSFTGSDGRKSS-- 90
            |:.......||     :.||..|       :|.|:.||.|.              |..|.:::  
Mouse    12 DHPSSTHSDPE-----SLGGADTKVLGSVSDLEPVEEADGD--------------GKGGSRAALY 57

  Fly    91 PEQTNLSPTVQKRRRQA------ANA-RERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQMA 148
            |....||...::|||:|      |:| |||.|:...|.||..||:::|....|:||||.|.|::|
Mouse    58 PHPQQLSREEKRRRRRATAKYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLA 122

  Fly   149 QSYILALCDLLN 160
            ..||..|..:|:
Mouse   123 ICYISYLNHVLD 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 26/61 (43%)
Nhlh2NP_848892.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..81 20/87 (23%)
bHLH_TS_HEN2 63..135 CDD:381545 30/72 (42%)

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