DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and Neurod2

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_035025.3 Gene:Neurod2 / 18013 MGIID:107755 Length:383 Species:Mus musculus


Alignment Length:99 Identity:46/99 - (46%)
Similarity:62/99 - (62%) Gaps:13/99 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 EAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERLRE 128
            ||:|:    :.|:|     |...||.:..:...|    |.|||.||||||.||:.||||.:.||:
Mouse    96 EAEGE----RPKKR-----GPKKRKMTKARLERS----KLRRQKANARERNRMHDLNAALDNLRK 147

  Fly   129 VVPAPSIDQKLSKFETLQMAQSYILALCDLLNNG 162
            |||..|..|||||.|||::|::||.||.::|.:|
Mouse   148 VVPCYSKTQKLSKIETLRLAKNYIWALSEILRSG 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 34/54 (63%)
Neurod2NP_035025.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..130 15/46 (33%)
bHLH_TS_NeuroD2 89..181 CDD:381563 45/97 (46%)
Nuclear localization signal. /evidence=ECO:0000255 108..114 2/5 (40%)
Neuro_bHLH 181..311 CDD:463621 1/1 (100%)

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