DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and Neurod1

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_035024.1 Gene:Neurod1 / 18012 MGIID:1339708 Length:357 Species:Mus musculus


Alignment Length:164 Identity:54/164 - (32%)
Similarity:84/164 - (51%) Gaps:27/164 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SQYLGSPNYNLTQLPP------VSGQDYGQGA-FLSPEWQFLDAA------GGTQTELGPIMEAQ 66
            |..:|.|.   .|.||      :|.||....| ....|.:.::|.      ||.:.|....:|.:
Mouse     8 SGLMGEPQ---PQGPPSWTDECLSSQDEEHEADKKEDELEAMNAEEDSLRNGGEEEEEDEDLEEE 69

  Fly    67 GQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKR---RRQAANARERKRMNGLNAAFERLRE 128
            .:..:.:..::.        ::..|::..::....:|   ||..||||||.||:|||||.:.||:
Mouse    70 EEEEEEEEDQKP--------KRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAALDNLRK 126

  Fly   129 VVPAPSIDQKLSKFETLQMAQSYILALCDLLNNG 162
            |||..|..|||||.|||::|::||.||.::|.:|
Mouse   127 VVPCYSKTQKLSKIETLRLAKNYIWALSEILRSG 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 34/54 (63%)
Neurod1NP_035024.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..94 17/96 (18%)
bHLH_TS_NeuroD1 75..160 CDD:381562 37/92 (40%)
Nuclear localization signal. /evidence=ECO:0000255 87..93 0/5 (0%)
Neuro_bHLH 160..284 CDD:463621 1/1 (100%)

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