DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and HLH4C

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_061498807.1 Gene:HLH4C / 1275714 VectorBaseID:AGAMI1_002064 Length:142 Species:Anopheles gambiae


Alignment Length:107 Identity:35/107 - (32%)
Similarity:57/107 - (53%) Gaps:14/107 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 PIMEAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQA------ANA-RERKRMNG 118
            |:..:.|...|.:.::..:|.       .:.|.:||:...::|||:|      |:| |||.|:..
Mosquito    42 PVYGSAGPVRQRKQQQDPSSI-------QTTEFSNLTREERRRRRRATLKYRTAHATRERIRVEA 99

  Fly   119 LNAAFERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLLN 160
            .|.||..||:::|....|:||||.|.|::|..||..|..:|:
Mosquito   100 FNVAFSELRKLLPTLPPDKKLSKIEILKLAICYISYLNHVLD 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 26/61 (43%)
HLH4CXP_061498807.1 None

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