DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and neurod2

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_068080586.1 Gene:neurod2 / 114435 ZFINID:ZDB-GENE-010608-3 Length:373 Species:Danio rerio


Alignment Length:125 Identity:48/125 - (38%)
Similarity:71/125 - (56%) Gaps:11/125 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GGTQTELGPIMEAQGQHTQPQTKRRSNSFTGSDG---RKSSPEQTNLSPTVQKR---RRQAANAR 111
            ||::.:    .|..|:....:.....:.....||   :|..|::..::|...:|   |||.||||
Zfish    65 GGSRAQ----SEIAGEEDYDEDVDEDDCGEEGDGDRPKKRGPKKRKMTPARLERSKVRRQKANAR 125

  Fly   112 ERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNGDVEVDAAAY 171
            ||.||:.||:|.:.||:|||..|..|||||.|||::|::||.||.::|.||. ..|..:|
Zfish   126 ERTRMHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRNGK-RPDVVSY 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 33/54 (61%)
neurod2XP_068080586.1 bHLH_TS_NeuroD2 92..176 CDD:381563 40/83 (48%)
Neuro_bHLH 176..295 CDD:463621 3/10 (30%)

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