DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and neurod6a

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_073796082.1 Gene:neurod6a / 114414 ZFINID:ZDB-GENE-010608-1 Length:391 Species:Danio rerio


Alignment Length:136 Identity:46/136 - (33%)
Similarity:67/136 - (49%) Gaps:22/136 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LDAAGGTQTELGPIMEAQGQHTQPQTKRRS--------NSFTGSDGRKSSPEQTNL----SPTVQ 101
            :|...|.......:.:.:|...:|..|..:        :|....|.|:...::..|    .|..:
Zfish    76 MDTQFGANFPRDCVGDLKGNKQEPFEKEETLSHVMDDDDSEKDEDEREDGQDENGLPRRRGPRKK 140

  Fly   102 KR----------RRQAANARERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQSYILALC 156
            |.          ||..||||||.||:|||.|.:.||:|||..|..|||||.|||::|::||.||.
Zfish   141 KMTKARVDRVKVRRMEANARERNRMHGLNNALDSLRKVVPCYSKTQKLSKIETLRLAKNYIWALS 205

  Fly   157 DLLNNG 162
            ::|:.|
Zfish   206 EILSTG 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 33/54 (61%)
neurod6aXP_073796082.1 None

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