DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and neurog3

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_571890.1 Gene:neurog3 / 114411 ZFINID:ZDB-GENE-010608-4 Length:208 Species:Danio rerio


Alignment Length:162 Identity:49/162 - (30%)
Similarity:68/162 - (41%) Gaps:46/162 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YSSASEEDGSSQYLGSPNYNLTQLPPVSGQDYGQGAFL-SPEWQFLDAAGGTQTELGPIMEAQGQ 68
            :|||||          |.:..|.:.......|.:.|.| |.||                      
Zfish    20 WSSASE----------PKFGSTDMTKSQPIKYNREAELASKEW---------------------- 52

  Fly    69 HTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKR--RRQAANARERKRMNGLNAAFERLREVVP 131
                       |||..:.:.|:.:...|..|.::|  ||..||.|.|.||:.||:|.:.||.|:|
Zfish    53 -----------SFTFREDKTSNGKLKKLMSTSRQRGNRRVKANDRGRHRMHNLNSALDNLRSVLP 106

  Fly   132 APSIDQKLSKFETLQMAQSYILALCDLLNNGD 163
            ....|.||:|.|||:.|::||.||.:.|...|
Zfish   107 TFPDDAKLTKIETLRFARNYIWALSETLRIAD 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 27/54 (50%)
neurog3NP_571890.1 bHLH_TS_NGN3_ATOH5 72..139 CDD:381561 31/67 (46%)

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