DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and LOC110440056

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_021334761.1 Gene:LOC110440056 / 110440056 -ID:- Length:207 Species:Danio rerio


Alignment Length:143 Identity:46/143 - (32%)
Similarity:68/143 - (47%) Gaps:27/143 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 QLPPVSGQDYG-QGAFLSPEWQFLDA-AGGTQTELG-----PIMEAQGQHTQPQTKRRSNSFTGS 84
            ||.|.|  .|| |..|...:..|.|. :...|.|:|     .:::...:.||.|.:..:....  
Zfish    47 QLSPWS--SYGCQSVFPEAQLTFTDLDSQSPQLEVGAEVDSSLLDEPHEMTQQQQRCLATHHP-- 107

  Fly    85 DGRKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQ 149
                            .|.:|.|||.||||||..:|:|||.||..||....:::|||.:||::|.
Zfish   108 ----------------YKVQRHAANIRERKRMLSINSAFEELRCHVPTFPYEKRLSKIDTLRLAI 156

  Fly   150 SYILALCDLLNNG 162
            :||..|.::|.:|
Zfish   157 AYIALLREILLSG 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 27/54 (50%)
LOC110440056XP_021334761.1 bHLH_TS_ceHLH13_like 107..169 CDD:381422 29/79 (37%)

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