DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and atoh1c

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_021336148.1 Gene:atoh1c / 100498672 ZFINID:ZDB-GENE-090805-1 Length:204 Species:Danio rerio


Alignment Length:96 Identity:49/96 - (51%)
Similarity:64/96 - (66%) Gaps:2/96 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQSYIL 153
            ||.||:::: ..::|||.|||||||:||.|||.||:|||.|:|....|:||||.|||||||.||.
Zfish    58 SSEEQSSIA-RARRRRRLAANARERRRMLGLNVAFDRLRSVIPNVESDRKLSKSETLQMAQIYIS 121

  Fly   154 ALCDLLNNGDVEVDAAAYTI-FGDSDSGFGL 183
            .|.:||.:.|.:.:....|: ..|.|...||
Zfish   122 TLSELLEDKDCDPETPYPTLTMQDQDITKGL 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 36/54 (67%)
atoh1cXP_021336148.1 bHLH_SF 80..127 CDD:469605 29/46 (63%)

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