DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and neurog2

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_002934289.2 Gene:neurog2 / 100493110 XenbaseID:XB-GENE-491040 Length:213 Species:Xenopus tropicalis


Alignment Length:119 Identity:43/119 - (36%)
Similarity:60/119 - (50%) Gaps:14/119 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 MEAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPT--VQKRRRQAANARERKRMNGLNAAFER 125
            ::||.|...|.:            |:|.|...|....  |:|.||..||.|||.||:.||:|.:.
 Frog    52 LQAQEQENSPPS------------RRSRPRTKNGETVLKVKKTRRIKANNRERNRMHHLNSALDS 104

  Fly   126 LREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNGDVEVDAAAYTIFGDSDS 179
            ||||:|:...|.||:|.|||:.|.:||.||.:.|...:....|:..:.....||
 Frog   105 LREVLPSLPEDAKLTKIETLRFAYNYIWALSETLRLAEHGSSASTLSPMSVQDS 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 29/54 (54%)
neurog2XP_002934289.2 bHLH_TS_NGN2_ATOH4 74..142 CDD:381560 32/67 (48%)

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