DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and Tcf24

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001272354.1 Gene:Tcf24 / 100039596 MGIID:3780500 Length:166 Species:Mus musculus


Alignment Length:118 Identity:40/118 - (33%)
Similarity:55/118 - (46%) Gaps:12/118 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 QPQTKRRS--NSFTGSDGRKSSPEQTNLSPT----VQKR----RRQAAN-ARERKRMNGLNAAFE 124
            :|.:..||  ::...:..|..||..|...||    |..|    |..||| ||||.|:..|..||.
Mouse     5 RPASSPRSAESAAPPAAARDWSPGPTGTGPTGLSGVAARSGGGRPAAANAARERSRVQTLRHAFL 69

  Fly   125 RLREVVPAPSIDQKLSKFETLQMAQSYILALC-DLLNNGDVEVDAAAYTIFGD 176
            .|:..:|:...|.||||.:.|.:|.:||..|. .|.::.|...|.....:.||
Mouse    70 ELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQDDTDAPGDPGLGALRGD 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 24/56 (43%)
Tcf24NP_001272354.1 bHLH_TS_TCF24 49..104 CDD:381553 23/54 (43%)

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