DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc and Kif3c

DIOPT Version :9

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_445938.1 Gene:Kif3c / 85248 RGDID:621538 Length:796 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820
KISc 12..340 CDD:214526
Apolipoprotein 595..744 CDD:279749
Kif3cNP_445938.1 KISc_KIF3 9..367 CDD:276822
Kinesin 16..367 CDD:278646
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 251..292
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..421
GBP_C <463..571 CDD:303769
coiled coil 540..551 CDD:293879
coiled coil 560..571 CDD:293879
Globular. /evidence=ECO:0000255 633..793
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 754..796
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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