DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc and PAKRP1

DIOPT Version :9

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_567423.1 Gene:PAKRP1 / 827054 AraportID:AT4G14150 Length:1292 Species:Arabidopsis thaliana


Alignment Length:1250 Identity:295/1250 - (23%)
Similarity:481/1250 - (38%) Gaps:406/1250 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EREIPAE--------DS-IKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVF 59
            :|::.||        || :||:.|.:|||..||  |...|.|    :.::.::::|:.:.||.:.
plant    74 KRKLSAETATESGFSDSGVKVIVRMKPLNKGEE--GDMIVEK----MSKDSLTVSGQTFTFDSIA 132

  Fly    60 KPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTM---------EGVIGDSVKQGII 115
            .|.::||:::......:|.:.|:|:|.::||||||.||||:||         |.:.||  ::|:.
plant   133 NPESTQEQMFQLVGAPLVENCLSGFNSSVFAYGQTGSGKTYTMWGPANGLLEEHLCGD--QRGLT 195

  Fly   116 PRIVNDIFNHIYAMEV-----NLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGA 175
            ||:...:|..|...:|     .|.:..:.|..|||.::|.||||.|:.||.:.||.....||:..
plant   196 PRVFERLFARIKEEQVKHAERQLNYQCRCSLLEIYNEQITDLLDPSQKNLMIREDVKSGVYVENL 260

  Fly   176 TERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQ------ENLENQKKLSGKL 234
            ||.:|.:..||.:::.:|..||....|::|..|||||.||...|:.      :.|.:.|  :.::
plant   261 TEEYVKNLTDVSQLLIKGLGNRRTGATSVNTESSRSHCVFTCVVESRCKNVADGLSSFK--TSRI 323

  Fly   235 YLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALAD----GNKTHIPYRDSKLTRILQ 295
            .||||||||:...|||.|..|.||.|||:|||.|||:|:.||:    |...|||||||:||.:||
plant   324 NLVDLAGSERQKSTGAAGERLKEAGNINRSLSQLGNLINILAEISQTGKPRHIPYRDSRLTFLLQ 388

  Fly   296 ESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNA 360
            |||||||:..:|...||:....|||.|||.|.:|||.::|...|||.:           :.:.|.
plant   389 ESLGGNAKLAMVCAVSPSQSCRSETFSTLRFAQRAKAIQNKAVVNEVM-----------QDDVNF 442

  Fly   361 RLKGKVEKLEIELAR------------------WRAGETVK------------------------ 383
             |:|.:.:|..||.|                  |.|..::.                        
plant   443 -LRGVIHQLRDELQRMKNDGNNPTNPNVAYSTAWNARRSLNLLRSFGLGHPRSLPHEDNDGDIEM 506

  Fly   384 --------------------AEEQIN----------------------------MEDLMEASTPN 400
                                |.|.||                            |||.. ..|.|
plant   507 EIDEAAVERLCVQVGLQSSLASEGINHDMNRVKSIHSSDGQSIEKRLPEDSDVAMEDAC-CHTEN 570

  Fly   401 LEVEAAQTAAAEAALAAQRTALANMSASV-----------------AVNEQARLATECERLYQQ- 447
            .|.|.......|.....:...:...|.::                 ::|:...::: |..|..| 
plant   571 HEPETVDNMRTETETGIRENQIKTHSQTLDHESSFQPLSVKDALCSSLNKSEDVSS-CPDLVPQD 634

  Fly   448 -----------LDDKDEEINQQSQ--------YAEQLKEQVMEQEELIANARREYETLQSEMARI 493
                       :||.:..:|..|.        ....||...:.....|.|:|:..:|  ||::..
plant   635 VTSANVLIADGVDDPEHLVNSASPSLCIDPVGATPVLKSPTLSVSPTIRNSRKSLKT--SELSTA 697

  Fly   494 QQENESAKEEVKEVLQALEELAVNYDQKSQEIDNKNKDIDALNEELQQKQSVF-----NAASTEL 553
            .|::...:..|.|..          |.........|....||:   .||..||     ..||:..
plant   698 SQKDSEGENLVTEAA----------DPSPATSKKMNNCSSALS---TQKSKVFPVRTERLASSLH 749

  Fly   554 QQLKDMSSH----QKKRIT----------EMLTNLLRDLGEVGQAIAPGESSI------------ 592
            :.:|.:.|:    .::|.|          |..|::.:  .:.|....||..:|            
plant   750 KGIKLLESYCQSTAQRRSTYRFSFKAPDSEPSTSISK--ADAGVQTIPGADAISEENTKEFLCCK 812

  Fly   593 -------------DLKMSALAGTDASKVEEDF------TMARLFISKMKTEAKNIAQRCSNMETQ 638
                         |:....|...|.|:|.|..      .:.::....::.|.. :.:.|:...::
plant   813 CKCREQFDAQQMGDMPNLQLVPVDNSEVAEKSKNQVPKAVEKVLAGSIRREMA-LEEFCTKQASE 876

  Fly   639 QADSNKKISEYEKD---------------------------------------LGEYRLL---IS 661
            ....|:.:.:|:.:                                       |.|::||   ..
plant   877 ITQLNRLVQQYKHERECNAIIGQTREDKIIRLESLMDGVLSKEDFLDEEFASLLHEHKLLKDMYQ 941

  Fly   662 QHEARMKS---LQESMREAEN---------KKRTLEEQIDSLR---------------EECAKLK 699
            .|...:|:   |:.:..|.||         ::..|.|:|..|:               :.|..||
plant   942 NHPEVLKTKIELERTQEEVENFKNFYGDMGEREVLLEEIQDLKLQLQCYIDPSLKSALKTCTLLK 1006

  Fly   700 AAEHVSAVNAEEKQRAEELRSMFDSQMDELREAHTRQVS---ELRDEIAA-------KQHEM--- 751
            .:.....|||..:.:.|.|....:.:.....||.|:.:|   |||.|:.|       ::||:   
plant  1007 LSYQAPPVNAIPESQDESLEKTLEQERLCWTEAETKWISLSEELRTELEASKALINKQKHELEIE 1071

  Fly   752 ----DEMKDVHQKLLLAHQQMTADYEKVRQEDAEKSSELQNIILTNERREQARKDLKGLEDTVAK 812
                :|:|:..|..:..|.:|...|..:.::..:        :|...||.|     .|::|    
plant  1072 KRCGEELKEAMQMAMEGHARMLEQYADLEEKHMQ--------LLARHRRIQ-----DGIDD---- 1119

  Fly   813 ELQTLHNLRKLFVQDLQQRIRKNVVNEESEEDGGSLAQKQKISFLENNLDQLTKVHKQLVRDNAD 877
                                    |.:.:...|...|:.:.|:.|...:..| ||.|:  ::...
plant  1120 ------------------------VKKAAARAGVRGAESRFINALAAEISAL-KVEKE--KERQY 1157

  Fly   878 LRCELPKLEKRLRCTMERVKA---LETALKEAKEG-----------------AMRD----RKRYQ 918
            ||.|...|:.:||.|.|.::|   |...||||:||                 |.|.    :|:::
plant  1158 LRDENKSLQTQLRDTAEAIQAAGELLVRLKEAEEGLTVAQKRAMDAEYEAAEAYRQIDKLKKKHE 1222

  Fly   919 YEVDRIKEAVRQKHL 933
            .|::.:.:.|.|.|:
plant  1223 NEINTLNQLVPQSHI 1237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 141/355 (40%)
KISc 12..340 CDD:214526 140/352 (40%)
Apolipoprotein 595..744 CDD:279749 38/226 (17%)
PAKRP1NP_567423.1 PLN03188 2..1292 CDD:215621 295/1249 (24%)
Motor_domain 92..434 CDD:277568 140/351 (40%)
Kinesin-relat_1 901..987 CDD:289481 14/85 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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