DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc and POK1

DIOPT Version :9

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001326049.1 Gene:POK1 / 820999 AraportID:AT3G17360 Length:2075 Species:Arabidopsis thaliana


Alignment Length:1053 Identity:277/1053 - (26%)
Similarity:453/1053 - (43%) Gaps:254/1053 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EDSIKVVCRFRPLNDSEE---------KAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQ 65
            :.:::|:.|.|||...|.         |..|...:.:..:.|..        :.||.|.....||
plant   166 DHNVQVLIRLRPLGTMERANQGYGKCLKQESPQTLVWLGHPEAR--------FTFDHVASETISQ 222

  Fly    66 EKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTM-------EGVIGDSVKQGIIPRIVNDIF 123
            ||::..|...:|.:.|:|||..:||||||.||||:||       ||.:|:..  |:..||...:|
plant   223 EKLFRVAGLPMVENCLSGYNSCVFAYGQTGSGKTYTMMGEISEAEGSLGEDC--GVTARIFEYLF 285

  Fly   124 NHIYAME-----VNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSP 183
            :.|...|     .||:|..|.|:.|||.::|.|||:.|..||.:.||..:..||:...|..|.:.
plant   286 SRIKMEEEERRDENLKFSCKCSFLEIYNEQITDLLEPSSTNLQLREDLGKGVYVENLVEHNVRTV 350

  Fly   184 EDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLS----GKLYLVDLAGSEK 244
            .||.:::.:|.:||.||.|.||..||||||||...:  |:|..:..|:    .:|.||||||||:
plant   351 SDVLKLLLQGATNRKIAATRMNSESSRSHSVFTCTI--ESLWEKDSLTRSRFARLNLVDLAGSER 413

  Fly   245 VSKTGAEGTVLDEAKNINKSLSALGNVISALAD---GNKTHIPYRDSKLTRILQESLGGNARTTI 306
            ...:||||..|.||.|||||||.||.||.:|.|   |...|:|||||:||.:||:|||||::|.|
plant   414 QKSSGAEGDRLKEAANINKSLSTLGLVIMSLVDLAHGKHRHVPYRDSRLTFLLQDSLGGNSKTMI 478

  Fly   307 VICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLKGKVEKLEI 371
            :...||:..:.:||.|||.|.:|||.::|...|||:.:.:.            ..|:.::.||::
plant   479 IANVSPSLCSTNETLSTLKFAQRAKLIQNNAKVNEDASGDV------------TALQQEIRKLKV 531

  Fly   372 EL----------------------ARWR-----AGET--VKAEEQI-NMEDLMEASTPNLEVEAA 406
            :|                      :|:.     ||||  .|...|: ||.|.|            
plant   532 QLTSLLKNHDSCGALSDCISSLEESRYSGTCKVAGETRQDKCHCQVKNMNDNM------------ 584

  Fly   407 QTAAAEAALAAQRTALANMSASVAVNEQARLATECERLYQQLDDKDEEINQQSQYAEQLKEQVME 471
                 ..||..::.|.:.:..|.|         |.||:...:.|.:|:       |:::|..:..
plant   585 -----IGALRREKIAESALQKSEA---------EIERIDCLVRDMEED-------AKRIKIMLNL 628

  Fly   472 QEELIANARREYETLQSEMAR--IQQENESAKEEVKEVLQALEELAVNYDQKSQEIDNKNKDIDA 534
            :||.:  ...|:.|..|.|.:  :.:||::.|.|:|.:..:::        |:.|:.....:...
plant   629 REEKV--GEMEFCTSGSLMTKECLIEENKTLKGEIKLLRDSID--------KNPELTRSALENTK 683

  Fly   535 LNEELQQKQSVF-----NAASTELQQLKD------------MSSHQKKR---------ITEMLTN 573
            |.|:||:.|..:     .|...|:..|:|            .|.|..|.         ...|.::
plant   684 LREQLQRYQKFYEHGEREALLAEVTGLRDQLLDVLEAKDESFSKHVMKENEMEKEFEDCRNMNSS 748

  Fly   574 LLRDLGEV----GQAIAPGESSIDLKMSALAGTDASKVEEDFTMARLF--ISKMKTE-----AKN 627
            |:|:|.|:    |:.:...:...::..|:..|.:.........||...  ||:::.|     :||
plant   749 LIRELDEIQAGLGRYLNFDQIQSNVVASSTRGAEQVNQAHKHLMAETMPTISEIQEEVAISHSKN 813

  Fly   628 IAQRCSNMETQQADSNK----KISEYEKDLGEYRLLISQHEARMKSLQESMREAENKKRTLEEQI 688
            . .|.:.::|.:.....    |:.:..|||.|.|.|..::|...||......:.|    .:.||:
plant   814 Y-DRGALVKTDEGIDRSILQFKLGKLMKDLEEARTLNCKYEKDHKSQLSQQEDIE----VVREQV 873

  Fly   689 DSLREECAK--LKAAEHVSAVNAEEKQRAEELRSMFDSQMDELREAHTRQVSELRDEIAAKQHEM 751
            ::   |.|:  |:..|.|.|:.:|.::|...|               |.:...::|.|.|::.|:
plant   874 ET---ETARTILELQEEVIALQSEFQRRICNL---------------TEENQSIKDTITARESEI 920

  Fly   752 DEMKDVHQKLLLAHQQMTADYEKVRQEDAEKSSELQNIILTNERREQARKDLKGLEDTVAKELQT 816
                          :.:..|:||.       :.||.|.|:...      |.:|.....:...:.:
plant   921 --------------RALNQDWEKA-------TLELTNFIVAGS------KSIKNASTQIESIICS 958

  Fly   817 LHNLRKLFVQDLQQRIRKNVVNEESEEDGGSLAQKQKISFLENNLDQLTKVHKQLVRDNADLRCE 881
            ...: ..::.|..::..||.:.:|           :.|..|:.:|:              |.|..
plant   959 FPQV-NAWIGDYVEKAAKNCIKKE-----------ETILLLQKSLE--------------DARIL 997

  Fly   882 LPKLEKRLRCTMERVKALETALKEAKEG----AMRDRKRYQYEVDRIKEAVRQKHLGRRGPQAQI 942
            :.::..:|    ..:|....||.|.:.|    ...:......:|||:.:.|.......:..|..|
plant   998 VAEMNLKL----NSLKGATIALNEFQLGGNAATTEEAFNLNNDVDRMSDEVDTLESNFKANQYSI 1058

  Fly   943 AKPIRSGQGAIAI 955
            .|..|..:.|:|:
plant  1059 LKTERHAEAALAV 1071

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 143/350 (41%)
KISc 12..340 CDD:214526 144/355 (41%)
Apolipoprotein 595..744 CDD:279749 35/161 (22%)
POK1NP_001326049.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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