DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc and Stard9

DIOPT Version :10

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:XP_036018388.1 Gene:Stard9 / 668880 MGIID:3045258 Length:4598 Species:Mus musculus


Alignment Length:1017 Identity:244/1017 - (23%)
Similarity:397/1017 - (39%) Gaps:313/1017 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SIKVVCRFRPLNDSEEKAGSKFVVKFPNNV-----------EENCISIAGKV--YLFDKVF---- 59
            :::|..|.|||:..|.|.|.:.:|:..:.|           .|:......||  :.||..:    
Mouse     3 NVQVAVRVRPLSKRETKEGGRIIVEVDDKVAKIRNVKVDSRPESFGDTREKVVAFGFDYCYWSVN 67

  Fly    60 --KPN-ASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVND 121
              .|: ||||.|:.:....:::....|||..:||||||.||||:||   :|.....|:.|||...
Mouse    68 PEDPHYASQEVVFRDLGTEVLSGAAKGYNICLFAYGQTGSGKTYTM---LGTPASVGLTPRICEG 129

  Fly   122 IF-NHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVN----LSVHEDKNRVPYVKGATERFVS 181
            :| .............||||:.|||.:::||||..|..|    |.|.|.....|||:|.::..|:
Mouse   130 LFIREDDCASQPCSRSIKVSFLEIYNERVRDLLKQSNQNKSYTLRVREHPEMGPYVQGLSQHVVT 194

  Fly   182 SPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQ--KKLSGKLYLVDLAGSEK 244
            :.:.|.:::|.|.:||..|.|:::|.|||||::|.|:..|..|:|.  .:.:.|:.||||||||:
Mouse   195 NYQQVIQLLEAGIANRITAATHVHEASSRSHAIFTIHCTQAILQNNLPSETASKINLVDLAGSER 259

  Fly   245 VSKTGAEGTVLDEAKNINKSLSALGNVISALADGN------------------------------ 279
            ...:..:..: .|..||||||..||.|||.||..:                              
Mouse   260 ADPSYCKDRI-TEGANINKSLVTLGIVISTLAQNSQVFSSCQSLSSAASSGGDSGVPSTTSGASS 323

  Fly   280 -------KTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVV 337
                   :::||||||.||.:|:||||||::|.:|...|||..:.|||.||:.:...||.:.|..
Mouse   324 GGGPARRQSYIPYRDSVLTWLLKESLGGNSKTIMVATVSPAHTSYSETMSTMRYASNAKNIINKP 388

  Fly   338 CVNEELTAEEWKRRYEKEKEKNARLKGKVEKLEIELARWRAGETVKAEEQINMEDLMEASTPNLE 402
            .|||               :.|.:|   :.:|..|:.|.:|       ..:|.|           
Mouse   389 RVNE---------------DANVKL---IRELREEIERLKA-------VLLNFE----------- 417

  Fly   403 VEAAQTAAAEAALAAQRTALANMSASVAVNEQARLATECERLYQQLDDKDEEINQQSQYAEQLKE 467
                               |.|.|   ::|:.  |....:.|..|.|.|.:.:.|........::
Mouse   418 -------------------LRNFS---SLNDD--LDESLQELVFQSDLKIDTLTQHWTEKRNDRQ 458

  Fly   468 QVMEQEELIANARREYETLQSEMARIQQ-ENESAKEEVKEVLQALEELAVNYDQKSQEID-NKNK 530
            .:||...:..|.:|....:.|.:..:.. |::.....|  ||..|:|...    |...|| ::.:
Mouse   459 ALMEHYGVDINRKRARVVIDSSLPHLMALEDDVLSTGV--VLYHLKEGTT----KIGRIDSDQEQ 517

  Fly   531 DIDALNEELQQKQSVFNA-----------------------ASTELQQLKDMSSHQKKRITEMLT 572
            ||....:.:::......:                       ||..|.|.:|...:....:|..:.
Mouse   518 DIVLQGQWIERDHCTITSTCGVVILRPTQGARCTVNGREVTASCRLTQGRDYGLNSGWCVTGAVI 582

  Fly   573 NLLRDLGEVGQAIA-----PGESSI----DLKMSALAGTDAS----KVEEDFTMARLFISK-MKT 623
            .|       |:|..     |.|:::    .||:....|:..|    .::.|.:.:||.:.. ::.
Mouse   583 TL-------GKAQKFRFNHPAEAAVLRHQRLKVGEALGSSGSLEWLDLDGDVSASRLGLCPVLRK 640

  Fly   624 EAKNIAQRCSNMETQQADSNKKISEYEKDLGEYRLLISQHEARMKSLQESMREAENKKRTLEEQI 688
            |.:.:.::|                 ::|                  |:..|.:|...|...|| 
Mouse   641 ERRVLEEQC-----------------DRD------------------QQPSRHSEIPYRAQPEQ- 669

  Fly   689 DSLREECAKLKAAEHVSAVNAEEKQRAEELRSMFDSQMDELREAHTRQVSELRDEIAAKQHEMDE 753
                ::|       ||.|:    ||:|:|.:|....:: ||...|..|                :
Mouse   670 ----QQC-------HVEAL----KQQAKEGQSRVQKEL-ELDHTHISQ----------------Q 702

  Fly   754 MKDVHQKLLLAHQQMTADYEKVRQEDAEKSSELQNIILTNERREQARKDLKGLEDTVAKE--LQT 816
            :|| :|:.||..:...|...:.:||..           ..|.:|        ||.:||.:  |.|
Mouse   703 IKD-NQQWLLTEETWLASLRETQQEGN-----------CGEEKE--------LEASVAPDAWLPT 747

  Fly   817 LHNLRKLFVQDLQQRI-----------RKNVVNEESEEDGGSLAQKQKISFLENNLDQLTKVHKQ 870
            :.......:...|:|:           |..|.|          .:::|:||      ||.::.| 
Mouse   748 VPQTPPSPLVQSQKRVVQPQCSPRHTTRATVWN----------IRQKKVSF------QLERIIK- 795

  Fly   871 LVRDNADLRCELPKLEKRLRCTMERVKALETALKEAKEGAMR 912
                           ::||.....|::.|.|......:||.|
Mouse   796 ---------------KRRLLEAQRRLEQLSTFFWIQDDGASR 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 131/384 (34%)
Smc <341..>807 CDD:440809 85/504 (17%)
Khc_CBD_cc 856..925 CDD:467880 12/57 (21%)
Stard9XP_036018388.1 KISc_KIF1A_KIF1B 2..391 CDD:276816 132/391 (34%)
Kinesin_assoc 390..504 CDD:465047 31/175 (18%)
FHA 475..605 CDD:469597 23/142 (16%)
SRPBCC 4394..4598 CDD:472699
Blue background indicates that the domain is not in the aligned region.

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