DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc and kif21a

DIOPT Version :9

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:XP_009296478.1 Gene:kif21a / 566481 ZFINID:ZDB-GENE-110411-237 Length:1598 Species:Danio rerio


Alignment Length:1029 Identity:263/1029 - (25%)
Similarity:447/1029 - (43%) Gaps:245/1029 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAK 74
            :.:::|..|.|| ..::||.....:..|....|...:....|.:.:|.||..:::|:.:|:...:
Zfish     3 DSTVRVALRIRP-QLAKEKIEGCHICTFVMPDEPQVVLGKDKAFTYDYVFDMDSTQDNIYSNCTE 66

  Fly    75 SIVTDVLAGYNGTIFAYGQTSSGKTHTM----EGVIGDSVKQGIIPRIVNDIFNHI-----YAME 130
            .::.....|||.||||||||.||||:||    :..|.|. ..|||||.|..:|..|     .|.|
Zfish    67 KLIEGCFEGYNATIFAYGQTGSGKTYTMGTGFDVAIPDE-DLGIIPRAVTHLFKGIEQRRQQAAE 130

  Fly   131 VNL---EFHIKVSYYEIYMDKIRDLLDVS--------KVNLSVHEDKNRVPYVKGATERFVSSPE 184
            .:.   ||.|...:.|:|.:::.||.|.:        |.::.:|||.:...|..|.|.|.|||..
Zfish   131 QSRPVPEFKISAQFLELYNEEVLDLFDTTRDMESRKQKSHIKIHEDASGGIYTVGVTTRNVSSEA 195

  Fly   185 DVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINV-------------KQEN------------L 224
            ::.:.::.|..:|..|.|.||..|||||::|.|::             :|:|            :
Zfish   196 EMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHICQIRVCAPADSPPEQDNETDNRLAGSSSEM 260

  Fly   225 ENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNK--THIPYRD 287
            |..:.|:.|.:.|||||||::.:|||.|....|..:||..|.|||||||||.|.:|  ||:||||
Zfish   261 EEFETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDRSKRSTHVPYRD 325

  Fly   288 SKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRY 352
            |||||:||:|||||:||.::.|.||:..:..||.:||.:..||:.:||.|.||:           
Zfish   326 SKLTRLLQDSLGGNSRTVMIACISPSDQDFMETLNTLKYANRARNIKNKVMVNQ----------- 379

  Fly   353 EKEKEKNARLKGKVEKLEIELARWRAGETVKAE---EQIN----MEDLMEASTPNLEVEAAQTAA 410
            ::..::.:.|:.::.:|::||..:|.|:.:..|   |.||    ...:::....||.:   :..|
Zfish   380 DRASQQISALRTEIARLQMELMEYRTGKRMVGEDGLESINDMFHENSMLQVENNNLRM---RVKA 441

  Fly   411 AEAALAAQRTALANMSASVAVNEQARLATECERLYQQLDDKDEEINQQSQYAEQLKEQVMEQEEL 475
            .:.|:.||...|..:           |:.:..:|..:..:..|||.                 .:
Zfish   442 MQEAIDAQGARLTQL-----------LSQQANQLLARAGEGSEEIG-----------------NM 478

  Fly   476 IANARREYETLQSEMARIQQENESAKEEVKEVLQALEELAVNYDQKSQEIDNKNKDIDAL--NEE 538
            |.|..:|.|.|::::...:..||:.:..:...           ..:.|..........||  .:.
Zfish   479 IQNYIKEIEDLRAKLLESEAVNENLRRNLTRA-----------SSRPQFYGASGSFSTALLGPDP 532

  Fly   539 LQQKQSVFNAASTELQQLKDMSSHQKKRITEMLTNLLRDLGEVGQAIAPGESSIDLKMSALAGTD 603
            .|:...:...|..:|::||.....:|||:.::|                                
Zfish   533 SQETSDIIEIAKKDLEKLKRREKKKKKRLQQLL-------------------------------- 565

  Fly   604 ASKVEEDFTMARLFISKMKTEAKNIAQRCSNMETQQADSNKKISEYEKDLGEYRLLISQHEARMK 668
            |.|.:||           :.|.:.:.:..:|.:..|.|..:|.   ||:..|            .
Zfish   566 ADKRDED-----------EDEEEEVEEDSANKDETQEDGEQKT---EKEQSE------------S 604

  Fly   669 SLQESMREAENKKRTLEEQIDSLREECAKLKAAEHVSAVNAEEKQRAEELRSMFDSQMDELREAH 733
            :.||...||.::     |:.|...:|       |.|.    ||:..|||.....||::|| :|..
Zfish   605 TNQEPEMEASDR-----EEGDGEEDE-------EDVE----EEEMEAEESSEETDSELDE-KEDF 652

  Fly   734 TRQVSELRDEIAAKQHEMDEMKDVHQKLLLAHQQMTADYEKVRQEDAEKSSELQNIILTNERREQ 798
            ...::.:..|||.||..:||:::..::|....||    ||       .|...||:.|        
Zfish   653 QADLANITCEIAIKQKLIDELENSQRRLHTLKQQ----YE-------HKLMMLQSKI-------- 698

  Fly   799 ARKDLKGLEDTVAKELQTLHNLRKL--FVQDLQQRIRK------NVVNEESEEDGGSLAQKQKIS 855
                    .||..:..:.||::..:  ..:|..:||:.      :|:|:|.::  ...|||:...
Zfish   699 --------RDTQLERDRVLHSMGSVESCSEDKTKRIKAEYEKKLSVMNKELQK--LQAAQKEHAR 753

  Fly   856 FLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRCTMERVKALETALKEAKEGAMRDRKRYQYE 920
            .|:|. .|..|..|:|..|..:::....:|.|:::...|:.:..|:..........:|:::.:::
Zfish   754 LLKNQ-SQYEKQLKKLQLDLTEMKKTKVRLMKQMKEQQEKSRMAESRRNREIATLKKDQRKQEHQ 817

  Fly   921 VDRIKEAVRQKHLGRRGPQAQIAKPIRSGQGAIAIRGGGAVGGPSPLAQVNPVN 974
            :..::...||:.|..|          |..:...|:|           .||.|::
Zfish   818 LKLLEAQKRQQELILR----------RKTEEVTALR-----------RQVRPIS 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 135/369 (37%)
KISc 12..340 CDD:214526 138/374 (37%)
Apolipoprotein 595..744 CDD:279749 31/148 (21%)
kif21aXP_009296478.1 KISc_KIF4 4..372 CDD:276823 135/369 (37%)
KISc 6..378 CDD:214526 138/373 (37%)
SCP-1 <389..809 CDD:114219 112/566 (20%)
Prefoldin 652..747 CDD:298833 26/123 (21%)
CEP63 668..973 CDD:293650 46/234 (20%)
DUF4200 740..834 CDD:290574 20/106 (19%)
Laminin_I 905..>1091 CDD:283627
WD40 1266..1577 CDD:238121
WD40 1272..>1576 CDD:225201
WD40 repeat 1278..1312 CDD:293791
WD40 repeat 1317..1351 CDD:293791
WD40 repeat 1371..1414 CDD:293791
WD40 repeat 1420..1464 CDD:293791
WD40 repeat 1471..1505 CDD:293791
WD40 repeat 1512..1536 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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