DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc and cmet

DIOPT Version :9

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster


Alignment Length:1249 Identity:302/1249 - (24%)
Similarity:502/1249 - (40%) Gaps:379/1249 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAEREIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIA---GKVYLFDKVFKPN 62
            |||:.    ..||:|..:.||   .|....|.:.||     |...|.:|   .:.|:||.||...
  Fly     1 MSAKN----ASSIQVCIKVRP---CEPGLTSLWQVK-----ERRSIHLADSHAEPYVFDYVFDEG 53

  Fly    63 ASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIY 127
            ||.::|::..||.||...:.|:|||||||||||||||:||   :||....|::.....:||..| 
  Fly    54 ASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTM---MGDEQNPGVMVLAAKEIFQQI- 114

  Fly   128 AMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEE 192
            :.|...:|.::|.|.|||.:||.|||:....:|.:||..|.:..| ...|..::|..|:..::..
  Fly   115 SSETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNV-NCEECIITSEVDLLRLLCL 178

  Fly   193 GKSNRHIAVTNMNEHSSRSHSVFLINV---KQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTV 254
            |...|.:..|||||.|||||::|.|.:   |.::.::...:...|.||||||||:..:|||.|..
  Fly   179 GNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAGSERADQTGARGAR 243

  Fly   255 LDEAKNINKSLSALGNVISAL---ADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFN 316
            |.|..:|||||..|.|||.:|   ||...|:  |||||||||||.||||||.|:|:....|:...
  Fly   244 LKEGGHINKSLLFLSNVIKSLSENADNRFTN--YRDSKLTRILQASLGGNAFTSIICTIKPSIME 306

  Fly   317 ESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEK----------EKEKNARLKGKVEKLEI 371
            ||:  |||.|..|||.::....|||.::.....:|.|:          |:|:....:.|||.||.
  Fly   307 ESQ--STLSFATRAKKIRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEERKNENQQKVEHLER 369

  Fly   372 ELA----RWRAGETVKAEEQINMEDLMEASTPNLEVEAAQTAAAEAAL----------------- 415
            ::.    :...|.::..:.|.........:.....:|.|:|...|..:                 
  Fly   370 QIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQFPKVSHLPKPVFFHT 434

  Fly   416 --AAQR----TALANMSASVAVNEQAR------LATEC--------------------------- 441
              |.:|    ....|:..|:.:..::.      |..||                           
  Fly   435 SNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECIDFGSPRPDVLKPMLTIRQLPDLPLTP 499

  Fly   442 ------ERLYQQLDD------KDEEINQQSQYAEQLKEQV---------MEQEELIANARREYET 485
                  :::.:::.|      .::....:.:..:.|||::         :|||.|....|  |:.
  Fly   500 KGPLTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNLEQESLAEKER--YDA 562

  Fly   486 LQSEMARIQQENESAKEEVKEV------------------------------------------- 507
            |:.|:..::.:||:|..::.|:                                           
  Fly   563 LEKEVTSLRADNEAANSKISELEEKLSTLKQTMRIMEVENQVAVGLEFEFEAHKKSSKLRVDDLL 627

  Fly   508 ---------------------------------------------------LQALEELAVNYDQK 521
                                                               .:.||:|..:.:.|
  Fly   628 SALLEKESTIESLQKSLDNLTRDVLRNSKEGHMLSIAPEQEDIAGDSICNKCEELEKLIADLESK 692

  Fly   522 --SQEIDNKNKDIDALNEELQQKQSVFNAASTE-LQQLKDMSSHQKKRITEMLTNLLRDLGEVGQ 583
              |.|.|....:|.::.::|:..:|.||.||:| :|:..|.     :|:::.|:......|::.:
  Fly   693 KNSCECDQLRLEIVSVRDKLESVESAFNLASSEIIQKATDC-----ERLSKELSTSQNAFGQLQE 752

  Fly   584 AIAPGESSIDLKMSA-LAGTDA-----SKVEEDFTMARLFISKMKTEAKNIA----QRCSNMETQ 638
            ..    .::|.:..| .||...     ..|:|.:...:....::::.|::.:    ||..|..|:
  Fly   753 RY----DALDQQWQAQQAGITTLHEKHEHVQEKYQKLQEEYEQLESRARSASSAEFQRLQNDNTK 813

  Fly   639 -QAD---SNKKISEYEKDLGEY--------RLLISQHE--ARMKSLQESMREAENKKRTLEEQI- 688
             |||   .|:::.|.:..|.|.        :|.|..||  |::|.|:.:..|.:.:...|..|: 
  Fly   814 FQADIASLNERLEEAQNMLTEVQNSESTVEKLRIQNHELTAKIKELETNFEEMQREYDCLSNQLM 878

  Fly   689 ------DSLREECAKLKAAEHVSAVNAEEKQRAEELRSMFDSQMDELREAHT-RQVSELRDEIAA 746
                  |:|||| .|.:...||     ||..|:..:.|.||.|..::...|. .|:||...:|..
  Fly   879 ESVQENDALREE-IKQRPTSHV-----EESMRSSGISSDFDEQKQDINLLHQFVQLSESVQQIEL 937

  Fly   747 KQH-------EMDEMK----DVHQKLLLAHQQMTADY--EKVRQEDA------------------ 780
            :.|       ..::||    :...||.|.    :|:|  |..||.||                  
  Fly   938 QHHSGISRLFRANQMKLDQSEPGLKLCLE----SAEYIEEDNRQSDATEPICLKGFLKRHRFQIK 998

  Fly   781 ---------------------------EKSSELQNIILT-NERREQARKDLKGLEDTVAKE---- 813
                                       |||:.::....| ||.|||    :..||..:.::    
  Fly   999 RLSQEHVDMGEEKRLLDIISQLEQEIEEKSALMEATEATINEMREQ----MTNLESALLEKSVII 1059

  Fly   814 ------LQTLHNLRK------LFVQDLQQRIRKNVVNEES------EED------GGSLAQKQKI 854
                  .:.:.:|.|      :..::||.|:.:.....||      :||      .....::|::
  Fly  1060 NKVEDYQRQIESLEKQNAEMTMVYEELQDRVTRESSMSESLLRVPPDEDTLPGCPTSPSRREQEV 1124

  Fly   855 SFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRCTMERVKALETALKEAKEGAM-------- 911
            :.|:.:   :|::..|:    :||:.||....::::.....:..|:|..:|..|..:        
  Fly  1125 ATLKTS---ITELQSQV----SDLKAELENHLRQIQLKDGNIARLQTDFEEMSERCLSMEVRLAE 1182

  Fly   912 --RDRKRYQYEVDR 923
              .|.|:.|..:||
  Fly  1183 LDEDTKQKQELLDR 1196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 140/331 (42%)
KISc 12..340 CDD:214526 140/336 (42%)
Apolipoprotein 595..744 CDD:279749 46/180 (26%)
cmetNP_524993.3 KISc 8..328 CDD:214526 140/336 (42%)
Motor_domain 8..321 CDD:277568 140/329 (43%)
Smc <680..1449 CDD:224117 118/547 (22%)
TMPIT 779..>867 CDD:285135 21/87 (24%)
Smc 1042..1910 CDD:224117 31/166 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437991
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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