DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc and Kif3C

DIOPT Version :9

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster


Alignment Length:652 Identity:197/652 - (30%)
Similarity:319/652 - (48%) Gaps:107/652 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAG--------KVYLFDKVFKPNASQEK 67
            ::||||.|.||:|.:|::...:.:|:    :.|..:|:..        |.::||.|:......|.
  Fly     3 ENIKVVVRCRPMNQTEKERNCQNIVE----INEFAVSVTNPSARISQQKKFIFDSVYNMKTDTEV 63

  Fly    68 VYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVN 132
            :|:|...|:|...:.||||||||||||..||||||:|....|...||||:..:.||..| :|..|
  Fly    64 IYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCFDHIFERI-SMTTN 127

  Fly   133 LEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSP----EDVFEVIEEG 193
            :.:...|:|.|||.::|||||:.::....::.....:|.:..:.....:.|    ...::.:..|
  Fly   128 VRYLALVTYLEIYNERIRDLLNKNENTNVINHFLKELPGIGVSVPTLTTQPVVNANQCYDWLHFG 192

  Fly   194 KSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQ-------KKLSGKLYLVDLAGSEKVSKTGAE 251
            ..||..|.|.||::|||||::|.|.::|....|.       ....|||.||||||||:..||||:
  Fly   193 NKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICRGKLSLVDLAGSERQRKTGAQ 257

  Fly   252 GTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFN 316
            |..|.||..||.||||||||||:|.||...|:|:|||||||:||:|||||.:|.::.|.||...:
  Fly   258 GDRLKEASQINLSLSALGNVISSLVDGKAKHVPFRDSKLTRLLQDSLGGNTKTLMISCISPTDIH 322

  Fly   317 ESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLKGKVEKLEIELARWRAGET 381
            ..||.|||.:..|||.:.|...:||:              .|:|||:....:: :.|.|     .
  Fly   323 YDETISTLRYASRAKNISNKPKINED--------------PKDARLRQYQNEI-LYLKR-----M 367

  Fly   382 VKAEEQINMEDLMEASTPNLEVEAAQTAAAEAALAAQRTALANMSASVAVNEQARLATECERLYQ 446
            ::..:||    :.:.:.||..:::       .....|.|.: |.:.:|.:.:   |...|:..::
  Fly   368 LQESQQI----INKNNDPNKIIKS-------PLKIIQHTNM-NSTKNVQIID---LGRNCKASFK 417

  Fly   447 Q------------LDDKDEEINQQSQYAEQLKEQVMEQEELIANARREYETLQSEMAR--IQQEN 497
            .            :..|:|...|.....:.:|..::..|.:     .::|..:..|||  ..|.:
  Fly   418 TNNSILTKPNFPLIQSKEEVQLQARSRIDLIKRSLIGGERI-----HDFELKEKHMARKYAAQRH 477

  Fly   498 ESA--------KEEVKEVLQALEELAVNYDQKSQEIDNKNKDIDALNEELQQKQSVFNAASTELQ 554
            .||        |.|.:::||.      :|...:||||.||..|....|:::..:...:..::|.|
  Fly   478 LSAIAIALSRVKCEDRDLLQG------HYATITQEIDIKNDYIRKCKEKIKMLEMEVSDLNSEFQ 536

  Fly   555 --------QLKDMSSHQKKRITEMLTNLLRDLGEVGQAIAPG---ESSI---DLKMSALAGTDAS 605
                    ::::: ..|.|...::......:.|:..:...|.   ::|:   ||||..:..:|..
  Fly   537 LDREDYLDEIRNL-GRQVKFHQQLFLKFSSNPGKFDRNWTPDTILQNSLWNDDLKMWRIPESDLI 600

  Fly   606 KV 607
            |:
  Fly   601 KL 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 140/340 (41%)
KISc 12..340 CDD:214526 141/346 (41%)
Apolipoprotein 595..744 CDD:279749 4/13 (31%)
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 140/340 (41%)
Kinesin 10..339 CDD:278646 136/333 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437709
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D24620at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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