DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc and Kif19A

DIOPT Version :9

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_996208.1 Gene:Kif19A / 41717 FlyBaseID:FBgn0038205 Length:750 Species:Drosophila melanogaster


Alignment Length:720 Identity:193/720 - (26%)
Similarity:318/720 - (44%) Gaps:190/720 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PA-EDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISI----------AGK----VYLFDK 57
            || |:.:.|..|.||..::.|:                ||.:          .||    .|.:|.
  Fly    30 PAQEERLVVAVRVRPSMEATER----------------CIEVISGGSLLYDDGGKSRPRQYSYDH 78

  Fly    58 VFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQ---------- 112
            ||:.|.|||:||......:|.|||.|.|..:||||.|.|||||||.|.:.....|          
  Fly    79 VFRENDSQEQVYKTTTAPLVRDVLNGLNAAVFAYGATGSGKTHTMLGPVPRKKPQTSDRAPPTAS 143

  Fly   113 -----------GIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDK 166
                       |::.|.:.|||:||.:.|. ....:.:||.|||.:.|||||:... .|.:.||.
  Fly   144 CDSTDVSSQDIGLMVRAIEDIFSHIESAEA-YSCRVSISYLEIYNELIRDLLNPGG-PLELREDH 206

  Fly   167 --NRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKK 229
              .|:. |.|.:|...||.::|..::.:|...|.:..|..|:.|||||::..|.|:.......|:
  Fly   207 RGQRIT-VAGLSEITTSSRKEVVSLLLKGNKARTMEPTAANQTSSRSHALLSIMVQARTPLGTKQ 270

  Fly   230 LSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRIL 294
              |:|:|.||||||:..||...|..|.|..:||:||.||||||:.|:.|.: ::.||||||||:|
  Fly   271 --GRLFLTDLAGSERAKKTKNRGKRLQEGAHINRSLLALGNVINGLSGGAR-YVNYRDSKLTRLL 332

  Fly   295 QESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTV----KNVVCVNE--ELTAEEWKRRYE 353
            :|:|.|..:|.::...:|.|.:..|||:||.:..||.::    :|.|.::|  :...:.::....
  Fly   333 KEALSGRCKTVMIAHVAPESKHRDETKNTLVYADRANSITTKLQNSVYIDEFKDFPTKHYQSLVS 397

  Fly   354 KEKEKNARLKGKVEKLEIELARWRAGETVKAEEQINMEDLMEASTPNLEVEAAQTAAAEAALAAQ 418
            :.:::.:||:.|     :...|.|:|                         ||..|||.||..:.
  Fly   398 ELRDEVSRLRTK-----MLTERPRSG-------------------------AAAAAAAAAASGSA 432

  Fly   419 RTALANMSASVAVNEQ-------------------------ARLATECE---------------- 442
            .|| .:.:.|.||.||                         .|...|.|                
  Fly   433 GTA-GSGAGSEAVQEQDEQRKTELRYLREQIVLTFKQQMKLRRKLLEAESHLLGLELDAERQHMI 496

  Fly   443 ---------RLYQQLDDKDEE----INQQSQYAE--QLKEQVMEQEELIANARREYETLQSEMAR 492
                     :||..:.|.|.|    :..::.:.|  .::::....:|:  ..|.|:|..|.....
  Fly   497 ISHWQGRIGKLYDAMGDDDIESEGSVALKNAWGELAAIEKETRRYKEI--RERTEHELEQCRQKG 559

  Fly   493 IQQENE----SAKEEVKEVLQAL--------EELAVNYDQKSQEIDNKNKDIDALNEELQQKQSV 545
            ::.|:|    .:.:|.:|:|..|        :::::..::.:::.:.:.:|:..|..|.|::   
  Fly   560 VKLEDELPERISSDEERELLALLCRVHELEADKVSLQAERLARQAELRRRDLQLLRAERQRR--- 621

  Fly   546 FNAASTELQQLKDMSSHQKKRITEMLTNL---LRDLGEVGQ------AIAPGESSIDLKMSAL-- 599
                     ..:|:.|.|::.|.|...:|   ||:|..:.|      .:.|..|:.:.|:..:  
  Fly   622 ---------LCEDIISSQRRLIEEGNVDLPDELRELYGLYQQEIHAGVVTPSTSNYERKLPPIYT 677

  Fly   600 AGTDA 604
            ||:|:
  Fly   678 AGSDS 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 128/359 (36%)
KISc 12..340 CDD:214526 129/368 (35%)
Apolipoprotein 595..744 CDD:279749 4/12 (33%)
Kif19ANP_996208.1 Motor_domain 35..371 CDD:277568 127/357 (36%)
Kinesin 41..371 CDD:278646 126/351 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437990
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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