DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc and cana

DIOPT Version :9

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster


Alignment Length:1154 Identity:283/1154 - (24%)
Similarity:490/1154 - (42%) Gaps:278/1154 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIA---GKVYLFDKVFKPNASQEKVYNEAA 73
            ||:|..:.||   .|....|.:.||     |...|.:|   .:.|:||.||...||.::|::..|
  Fly     8 SIQVCIKVRP---CEPGLTSLWQVK-----EGRSIQLADSHAEPYVFDYVFDEGASNQEVFDRMA 64

  Fly    74 KSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIK 138
            |.||...:.|.|||||||||||||||:||   :||....|::.....:||..| :.|...:|.::
  Fly    65 KHIVHACMQGSNGTIFAYGQTSSGKTYTM---MGDEQNPGVMVLAAKEIFQQI-SSETERDFLLR 125

  Fly   139 VSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTN 203
            |.|.|||.:||.|||:....:|.:||..|.:..| ...|..|:|.:|:...:..|...|.:..||
  Fly   126 VGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNV-NCKESIVTSEDDLLRQLYMGNKERVVGETN 189

  Fly   204 MNEHSSRSHSVFLINV---KQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSL 265
            |||.|||||::|.|.:   |.::.:|.......|.||||||||:|...       |.|    .||
  Fly   190 MNERSSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLVDLAGSEQVDPA-------DHA----SSL 243

  Fly   266 SALGNVISALADG--NKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGR 328
            ....|::.:|::.  :|.: .:|||||.||:..|||||..|:| ||....||.| |:.||:.||.
  Fly   244 MIFRNLVKSLSESVDSKPN-SFRDSKLPRIMLPSLGGNVLTSI-ICTITPSFVE-ESSSTISFGT 305

  Fly   329 RAKTV--KNVVC-VNEELT-AEEWKRRYEKEKEKNARLKGK------VEKLEIELARWRAGETVK 383
            .||.:  |..|| ::.|.| ..:..|.....|:|.|:.|.|      :::||..:.|    :.:|
  Fly   306 CAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLAKKKIKNESQLVLQELEGRIKR----DMLK 366

  Fly   384 AEEQINMED----------LMEASTPNLEVEAAQTAAAEAALAAQRTALANMSASVAVNEQARLA 438
            .....:::|          .:.||....:.........|.:...:.:.|.|:...:.  ::..:|
  Fly   367 IVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPEESRLPRPSKLTNLPKPLF--QRRGIA 429

  Fly   439 TECERLYQQLDDK---DEEINQQSQYAEQLKEQVMEQEELIANARREYETL------QSEMARIQ 494
            .:.:.:.:.|.:|   .:.::.....|:||..:...:...:..:::..|::      |:|::.:.
  Fly   430 PKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRIPSVMMSKKYQESVPNCDAPQTEISALT 494

  Fly   495 QENESAK-------EEVKEVLQALEEL------AVNYDQKSQEIDNKNKDI-DALNEELQQKQSV 545
            ..|:.||       |:||.:.:.:|.|      |||..::.:....|:|.: :.|...:.:|.|.
  Fly   495 ASNQVAKETIEKYEEQVKRLKETIERLEMENGKAVNLGEQFETHKAKSKQMEEELLSSISEKDST 559

  Fly   546 FNAASTELQQL-KDMSSHQK---------------KRITEMLTNLLRDLGEVGQAIAPGESSI-- 592
            ..:....|::| :|:..:.|               :||......|.|.|   ..|.|.|..|:  
  Fly   560 IVSLQQSLEELSRDVLRNSKEDQMRSMCPELESSCERICNKCLELERLL---PLASASGLDSVAC 621

  Fly   593 --DLKMSALAGTDASKVE---EDFTMARLFISKMKTEAKNIAQRCSN------------------ 634
              |...|.:|.| ..|:|   ..|:.|...:|:..|:.|.::::.|.                  
  Fly   622 QFDQLRSEIAAT-RMKLESMLSTFSHASCEVSQKTTDCKRLSEQISTAHDDFGQLQEKYNNLKHK 685

  Fly   635 -------METQQADSNKKISEYEKDLGEYRLLISQHEARMKSLQESMREAENKKRTLEEQIDSLR 692
                   ::|.|.|.|....:|.:...|||.|..:.:.:.:.||:...:.:.:..||:|:::.:.
  Fly   686 WSSQKLAIDTMQVDYNTIQQKYLQLQDEYRHLELRSDEQCQQLQDENSKLQAEIGTLKERVEEIH 750

  Fly   693 EECAKL----KAAEHVSAVNAEEKQRAEELRSMFD-----------------SQMDELREAHTRQ 736
            .|..::    ...|.:...|.|.|:|..:|:..||                 .:.|.|||.|.::
  Fly   751 SELLEVPNPDTHPEDMELQNQELKKRLSKLQWEFDEIQLNYECLSNELMSTIQECDALREEHKQR 815

  Fly   737 V--SELRD--------EIAAKQHEMD-EMKDVHQKLLLAHQQM-TADYEKVR------------- 776
            .  |:|..        |.:..::|:| ::.....||..:.||: ..||...|             
  Fly   816 TTNSDLESMKSSGVGTECSDPENELDTDLLQQFTKLSKSIQQIELTDYSGGRRLFIYNHAEQDQS 880

  Fly   777 -------------------QEDAE-----------------KSSELQNIILTNERRE----QARK 801
                               |.||.                 |.::.||::...:|..    |.::
  Fly   881 VPSLKLCLEPAKYLEGDGKQHDASDSVFLKGFLKCQRFQIVKINQEQNLVKEEDRMRDIIFQLKQ 945

  Fly   802 DLKGLEDTVAKELQTLHNLR-------------------KLFVQDLQQRIRKNVVNEESEEDGGS 847
            ::.|.::.:.:|.:.::|||                   |:..::||.:......|::       
  Fly   946 EVDGKKNLIEEEKEVINNLRAQITSLNQIETIKNQNAKTKILCEELQTKDTVQTANKQ------- 1003

  Fly   848 LAQKQKISFLENNLDQL-TKVHKQLVRDNADLRCEL-PKLEKRLRCTMERVKALETALKEAKEGA 910
              :.|::..|:.:|..| :||            ||| .||||  :...|::..|::.:.|..|..
  Fly  1004 --ESQEVLTLKTSLAHLKSKV------------CELQKKLEK--QSEDEKISELQSDIGEISECC 1052

  Fly   911 ------MRDRKRYQYE----VDRIKEA-VRQKHLGRRGPQA-QIAKPIR 947
                  :.|...:|.|    :|:::|: |..:|......:: .:.|||:
  Fly  1053 LSMELKLADIVNWQAEELRPLDQLQESGVELQHHSTTAEESLNVEKPIQ 1101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 128/328 (39%)
KISc 12..340 CDD:214526 131/338 (39%)
Apolipoprotein 595..744 CDD:279749 41/207 (20%)
canaNP_001027247.1 KISc 8..316 CDD:214526 129/334 (39%)
Motor_domain 8..310 CDD:277568 128/328 (39%)
SMC_prok_B <471..1270 CDD:274008 128/658 (19%)
Mplasa_alph_rch 924..1647 CDD:275316 40/201 (20%)
CENP-H 1204..>1266 CDD:283493
CALCOCO1 <1489..1850 CDD:285171
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437992
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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