DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc and Klp59C

DIOPT Version :9

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_611759.1 Gene:Klp59C / 37671 FlyBaseID:FBgn0034824 Length:626 Species:Drosophila melanogaster


Alignment Length:466 Identity:142/466 - (30%)
Similarity:209/466 - (44%) Gaps:69/466 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IKVVCRFRPLNDSEEKAGSKFVVKFPNN----VEE-----NCIS-IAGKVYLFDKVFKPNASQEK 67
            |.|..|.|||...|.....:.||..|:.    |.|     |.:. :....:.||.||....|...
  Fly   188 IMVCVRKRPLRRKELADREQDVVSIPSKHTLVVHEPRKHVNLVKFLENHSFRFDYVFDEECSNAT 252

  Fly    68 VYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVI---GDSVKQGIIPRIVNDIFNHIYAM 129
            ||...|:.::..:..|...|.||||||.||||:||.|..   ..|...||......|:|:.:..:
  Fly   253 VYEFTARPLIKHIFDGGMATCFAYGQTGSGKTYTMGGQFPGRHQSSMDGIYAMAAKDVFSTLKTV 317

  Fly   130 EVN-LEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEG 193
            ..| |...:..|::|||..::.|||...|..|.|.||:|:...|.|.|:..|.:..:|.:::|.|
  Fly   318 PYNKLNLKVYCSFFEIYGTRVFDLLMPGKPQLRVLEDRNQQVQVVGLTQNPVQNTAEVLDLLELG 382

  Fly   194 KSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLD-- 256
            .|.|....|:.|..|||||:||.|.::....|   ||.||..|:||||:|:    ||:.:..|  
  Fly   383 NSVRTSGHTSANSKSSRSHAVFQIVLRSAAGE---KLHGKFSLIDLAGNER----GADNSSADRQ 440

  Fly   257 ---EAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQES-LGG-NARTTIVICCSPASFN 316
               |...|||||..|...|.||. ...:|:|:|.||||::|::| :|| ..:|.::...||...:
  Fly   441 TRLEGSEINKSLLVLKECIRALG-RQSSHLPFRGSKLTQVLRDSFIGGKKVKTCMIAMISPCLHS 504

  Fly   317 ESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLKGKVEKLEIELARWRAGET 381
            ...|.:||.:..|.|          ||:.|.    ...::..:|.|                |.|
  Fly   505 VEHTLNTLRYADRVK----------ELSVES----IPSKRMPDANL----------------GST 539

  Fly   382 VKAEEQINMEDLM-EASTPNLEVEAAQTAAAEAA-LAAQRTALAN-MSASVAVNEQARLATECER 443
                   :|.|:: ::||..|...|:.|:..... .|.|.|..|| ::.|.....:....|..::
  Fly   540 -------SMSDIVCQSSTQRLFPCASSTSMPGGGNQAQQHTNTANDLNRSQKPTSKPTYPTSGQQ 597

  Fly   444 LYQQLDDKDEE 454
            |.|:......|
  Fly   598 LVQRKGSSQRE 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 118/340 (35%)
KISc 12..340 CDD:214526 118/347 (34%)
Apolipoprotein 595..744 CDD:279749
Klp59CNP_611759.1 KISc_KIF2_like 187..519 CDD:276818 117/338 (35%)
Kinesin 193..520 CDD:278646 116/344 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437822
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.