DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc and Klp3A

DIOPT Version :9

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001284830.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster


Alignment Length:1046 Identity:276/1046 - (26%)
Similarity:468/1046 - (44%) Gaps:209/1046 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AED--SIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNE 71
            :||  .:.|..|.|||..||...|.:..|:...:..........:.|.::.||..:.||:.::..
  Fly     3 SEDPSCVAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVNRNESYTYNYVFDIDDSQKDLFET 67

  Fly    72 AAKSIVTDVLAGYNGTIFAYGQTSSGKTHTM----EGVIGDSVKQGIIPRIVNDIFNHIYAMEVN 132
            ..::.|..:|.|||.||.|||||.||||:||    .||:.|.|  |:|||.|:|||..|..|:..
  Fly    68 CVQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVLDDHV--GVIPRAVHDIFTAIAEMQSE 130

  Fly   133 LEFHIKVSYYEIYMDKIRDLLDV---SKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGK 194
            ..|.:..|:.|:|.::..||...   .|..:.:.|.|||: .:.|.||..|:|.:.|.:.:..|.
  Fly   131 FRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNRI-IMPGLTELVVTSAQQVTDHLIRGS 194

  Fly   195 SNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKL-SGKLYLVDLAGSEKVSKTGAEGTVLDEA 258
            :.|.:|.|.|||.|||||::|.:.:....|:.::.: :.:..||||||||:.|||.|.|....|.
  Fly   195 AGRAVAATAMNETSSRSHAIFTLTLVATKLDGKQSVTTSRFNLVDLAGSERCSKTLASGDRFKEG 259

  Fly   259 KNINKSLSALGNVISALADGNKT-HIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKS 322
            .||||.|.||||||:||..|... :||||.|||||:||:|||||:.|.::.|.|||.:|.:||.|
  Fly   260 VNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYNVAETLS 324

  Fly   323 TLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLKGKVEKLEIELARWRAGETVKAEEQ 387
            ||.:..||..:||...||.:..|.|..           .||..::||.:||.   :|..:.:   
  Fly   325 TLRYADRALQIKNKPVVNLDPHAAEVN-----------MLKDVIQKLRVELL---SGGKMSS--- 372

  Fly   388 INMEDLMEASTPNLEVEAAQTAA--AEAALAAQRTALANMSASVAVNEQARLATECERLYQQ--- 447
                .|:.|      |.||...|  .|.:||.   ::||.:....:.||.|...:..|..||   
  Fly   373 ----SLISA------VGAAGLGAIPCEESLAG---SMANAAEIQRLKEQVRTLQDRNRKLQQELH 424

  Fly   448 -----LDDKDEEINQQSQYAEQLKEQVMEQEELI---------------ANARREYETLQS---- 488
                 |.:|:...:...|..::|:..|.|.:..:               .|..|::..|.:    
  Fly   425 QSLLDLTEKEMRAHIAEQAHDKLRSHVSELKNKLDQREQAQFGNENTNGDNEMRDFSLLVNRVHV 489

  Fly   489 EMARIQQE--------------------NESAKEEVKEVLQALEELAVNYDQKSQ----EIDNKN 529
            |:.|.|:|                    .||..:||.|:|.:..|   .|..|..    |:.|.|
  Fly   490 ELQRTQEELESQGHESRQRLSSRSHTEGGESGGDEVHEMLHSHSE---EYTNKQMNFAGELRNIN 551

  Fly   530 KDID---ALNEELQQKQSVFNAASTEL------QQLKDMSSHQKKRITEMLTNL-LRDLG----- 579
            :.:|   .|:|.:.:..|..::...::      |::.|:.: :::.:.:.|.|: .:|:.     
  Fly   552 RQLDLKQELHERIMRNFSRLDSDDEDVKLRLCNQKIDDLEA-ERRDLMDQLRNIKSKDISAKLAE 615

  Fly   580 EVGQAIAPGESSI-DLKMSALAGTDASKVEEDFTMARLFISKMKTEAKNIAQRCSNMETQQADSN 643
            |..:.:...|..| ||:...:...:..|:.:   ..|..|..:.||.:.:.:....:.......:
  Fly   616 ERRKRLQLLEQEISDLRRKLITQANLLKIRD---KEREKIQNLSTEIRTMKESKVKLIRAMRGES 677

  Fly   644 KKISEY----EKDLGEYRLLISQHEARMKS---LQESMREAENK--KRTLEEQI-------DSLR 692
            :|..::    ||:|.:    :...:.:|:|   .|:::...:.:  ||..||.:       |:| 
  Fly   678 EKFRQWKMVREKELTQ----LKSKDRKMQSEIVRQQTLHSKQRQVLKRKCEEALAANKRLKDAL- 737

  Fly   693 EECAKLKAAEHVSAVNAEEKQRAEELRSMFDSQMDELREAHTRQVSELRDEIAAKQHEMDEMKD- 756
            |..|..:|..|....|......:....:..||.:|       |::..:...|.| :|.::::.: 
  Fly   738 ERQASAQAQRHKYKDNGGSAAGSSNANAKTDSWVD-------RELEIILSLIDA-EHSLEQLMED 794

  Fly   757 ---VHQKLLLAHQQMTAD----YEKVR-----QEDAE----KSSELQNIILTNERREQARKDLKG 805
               ::....|..|:.|:|    .|:.|     :|:.|    :.|:||..:...:...:.|...:|
  Fly   795 RAVINNHYHLLQQEKTSDPAEAAEQARILASLEEELEMRNAQISDLQQKVCPTDLDSRIRSLAEG 859

  Fly   806 LED-----TVAKE-LQTLHNLRKLFVQDLQQR------IRKNVVNEESEEDGGS----------- 847
            ::.     ||:|: |:||...|:|....|.::      :|..:::.:.:||..|           
  Fly   860 VQSLGESRTVSKQLLKTLVQQRRLQASSLNEQRTTLDELRAQLLDAQQQEDAASKRLRLLQSQHE 924

  Fly   848 ---LAQ----KQKISFLENNLD-------------QLTKVHKQLVRDNADLRCELPKLEKRLRCT 892
               |||    ::|:|.|....:             |..::.::|:.....|:.||.||..:.:..
  Fly   925 EQMLAQQRAYEEKVSVLIRTANQRWAEARSPAEDQQRNQILEELLSSREALQQELDKLRAKNKSK 989

  Fly   893 MERVKA 898
            .:.||:
  Fly   990 SKAVKS 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 136/333 (41%)
KISc 12..340 CDD:214526 136/336 (40%)
Apolipoprotein 595..744 CDD:279749 27/164 (16%)
Klp3ANP_001284830.1 KISc_KIF4 7..336 CDD:276823 134/331 (40%)
Kinesin 14..335 CDD:278646 133/323 (41%)
Smc <396..>994 CDD:224117 116/617 (19%)
FlaC 522..633 CDD:225888 24/114 (21%)
TCR 1075..1110 CDD:281618
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437981
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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