DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc and klp3

DIOPT Version :9

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_594686.1 Gene:klp3 / 2542195 PomBaseID:SPAC1834.07 Length:554 Species:Schizosaccharomyces pombe


Alignment Length:604 Identity:213/604 - (35%)
Similarity:324/604 - (53%) Gaps:80/604 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVY----LFDKVFKPNASQEKVYNEA 72
            |||||||.||.|..|:..|...|: :|.|  ::.:.|....|    :||:||.|:::|..:::.:
pombe     3 SIKVVCRIRPTNQLEQDLGGNNVI-YPLN--DSTVHIETSDYSGNFVFDRVFHPSSTQNDIFSYS 64

  Fly    73 AKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHI 137
            .:|.|.|:..|||||:.|||||.||||:||.|:..:..|:|:.||::..||:.|.......|:.:
pombe    65 IESTVDDLFLGYNGTVLAYGQTGSGKTYTMMGIENNFEKEGMTPRMLRRIFDKIRDSPSTTEYEV 129

  Fly   138 KVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVT 202
            ||||.||||:||.|||......|:|||||.:..||:|....:|||..:..:::.:|..:|.:|.|
pombe   130 KVSYMEIYMEKIHDLLSEKNDRLTVHEDKLQGVYVQGLKTIYVSSETEALDILNKGMGSRAVAST 194

  Fly   203 NMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSA 267
            :||..||||||:|::.|.|.:.|:.:...|:|:||||||||.|.|:||.|..|:|||.||:|||.
pombe   195 SMNAQSSRSHSIFVLEVVQTDTESGETRRGRLFLVDLAGSESVGKSGAVGQTLEEAKKINRSLST 259

  Fly   268 LGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKT 332
            ||.||::|.|...:|:|||||||||||:||||||:|||::|.|||.|:|.:||.|||.||.|||:
pombe   260 LGMVINSLTDSKLSHVPYRDSKLTRILKESLGGNSRTTLIINCSPDSYNATETLSTLRFGHRAKS 324

  Fly   333 VKNVVCVNEELTAEEWKRRYEKEKEK------NARLKGKVEKLEIELARWRAGETVKAEEQINME 391
            :||...||.||:.:|.||:....|:.      .||:...::........|      ..|..:.:.
pombe   325 IKNKAVVNSELSVDEMKRQLYIYKDALSRCVCGARINNNLDYNNCHSNVW------SGEHSLTLS 383

  Fly   392 DLMEASTPNL-EVEAAQTAAAEAALAAQRTALANMSASVAVNEQARLATECERLYQQLDDKDEEI 455
            :|.|.|  || |.|..|         ..||                       :.:..:|:||..
pombe   384 NLAEKS--NLKEAEIIQ---------GNRT-----------------------IQESNNDRDEST 414

  Fly   456 NQQSQYAEQLKEQVMEQEELIANARREYETLQSEMARIQQENESAKEEVKEVLQALEELAVNYDQ 520
                  ...:.....:.:.:    .|.|...|.|:.:......|.|:::.:::.||.:....|.:
pombe   415 ------VASIHRHNFDSDSI----NRLYAEAQLELKQRDGVLSSTKQQLSDLMTALGDAQERYVE 469

  Fly   521 --KSQEIDNKNKDIDALNEE----LQQKQ---SVFNAASTELQQLKDMSSH-------QKKRITE 569
              |:..:::.....::||::    ::||.   |:.|..:..||:|..:.|.       |:|.|..
pombe   470 LVKNHRVNSNLTANNSLNDKPGFTIEQKDKNFSINNERNNFLQKLSTLDSSLAALVNVQRKLIKA 534

  Fly   570 MLTNLLRDLGEVGQAIAPG 588
            :::......|.|.:.|..|
pombe   535 LISKERPQNGTVIKKIQGG 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 159/324 (49%)
KISc 12..340 CDD:214526 161/331 (49%)
Apolipoprotein 595..744 CDD:279749
klp3NP_594686.1 KIP1 1..546 CDD:227392 210/595 (35%)
KISc_KHC_KIF5 1..325 CDD:276820 159/324 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 294 1.000 Domainoid score I269
eggNOG 1 0.900 - - E2759_KOG0240
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 1 1.000 - - oto100557
orthoMCL 1 0.900 - - OOG6_100344
Panther 1 1.100 - - LDO PTHR24115
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2595
SonicParanoid 1 1.000 - - X952
TreeFam 00.000 Not matched by this tool.
109.840

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