DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc and klp-18

DIOPT Version :10

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_501093.1 Gene:klp-18 / 177474 WormBaseID:WBGene00002228 Length:932 Species:Caenorhabditis elegans


Alignment Length:1045 Identity:268/1045 - (25%)
Similarity:442/1045 - (42%) Gaps:229/1045 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IKVVCRFRP---LNDSEEK--AGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEA 72
            ||...|.||   |....|.  .|.:.|....:|        ..|.|....:|..::|||.|:...
 Worm     5 IKCYGRVRPSARLGAPSESLFVGGRVVTIETDN--------GSKRYELHHIFDSSSSQEDVFGTV 61

  Fly    73 AKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIG---DSVKQGIIPRIVNDIFNHI--YAMEV- 131
            ||.||.|.:.|||||:||||||.|||||||.|...   |....|:|||.|..:|.|:  .|.|. 
 Worm    62 AKKIVEDCVEGYNGTVFAYGQTGSGKTHTMLGPCDSWTDQELMGLIPRSVEHVFQHLDTKAKECQ 126

  Fly   132 NLEFHIKVSYYEIYMDKIRDLLDV-SKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKS 195
            .|.|.:.|.:.|:|.:.|.|||:. :||.|   .|..:...:.||..:.|.:|.|:..::::|..
 Worm   127 KLTFSVSVEFVELYNEVIYDLLNAKNKVQL---RDSGKDIQLVGALSKNVDNPLDLMHLVQKGWQ 188

  Fly   196 NRHIAVTNMNEHSSRSHSVFLINVKQENLENQ--KKLSGKLYLVDLAGSEKVSKTGAEGTVLDEA 258
            .|....|.||..|||||::.:|.:|.:....:  |:.|..|.||||||||:.:.|.:.|..|.||
 Worm   189 ERSTGSTAMNAESSRSHALLIIRIKTQERTGELVKERSSILNLVDLAGSERQTHTKSSGDRLKEA 253

  Fly   259 KNINKSLSALGNVISALADGNKT--HIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETK 321
            .|||.||:.||..|..|||.:|.  |:|||||.||.||:.|||||::|.:::...|......|:.
 Worm   254 TNINSSLTVLGRCIRLLADPSKAKGHVPYRDSHLTHILKNSLGGNSKTAVIVNMHPDRDFAQESN 318

  Fly   322 STLDFGRRAKTVKNVVCVNEELTA----------EEWKRRYEKEKEK-NARLKGKVEKLEIELAR 375
            |||.|.:....:.|:...||.:|.          :|.::..::.:|| ......::::.|:|..|
 Worm   319 STLMFAQSCTMIMNIATRNEVMTGDQESSYKKAIQELRQEVDETREKVRTEFASQLDEAEVEQLR 383

  Fly   376 WRAGETVKAEEQINMEDLMEAS----TPNLEVE---------AAQTAAAEAALAAQRTALANMSA 427
            .:........|.:::....:.:    |...|.|         .::.:||.::...:..||.|.:.
 Worm   384 LKTENNSLRLENVDLRAKYDFALLKYTIGSENEQIVNEFKKIISEFSAANSSSPFECIALKNQTL 448

  Fly   428 SVAVNEQARLATECERLYQQLDDKDEEINQQSQYAEQLKEQVMEQEELIANARREYETLQSEMAR 492
            .:.:...       |:.||:|..:...:  :::|.|.|...::               :|:..|:
 Worm   449 QLEIEAS-------EKRYQELQKETSAL--RNRYQENLDATIL---------------MQTPSAK 489

  Fly   493 IQQENESAKEEVKEVLQALEELAVNYDQKSQEIDNKNKDIDALNEELQQKQSVFNAASTELQQLK 557
            .::.:...|....:...:...:|:..:.::.|  :...|:...||:|          |.||..||
 Worm   490 ERRSSSRPKRRETQYRPSPARMALFAEVETSE--DAVLDLQCQNEKL----------SCELSSLK 542

  Fly   558 DMSSHQK---KRI-TEMLTN-----LLRDLGEVGQAIAPGESSIDLKMSALAGTDASKVEEDFTM 613
            |  .|::   |.| ||.|..     |.:::..|.:::...|:.            |...:|..|.
 Worm   543 D--KHEEATSKSIETERLLQGEIVALQKEVSIVSESLRKSEAV------------AEGYKEKVTA 593

  Fly   614 ARLFISKMKTEAKNIAQRCSNMETQQADSNKKISEYEKDLGEYRL----LISQHEARMKSLQESM 674
            ..|.:.|:........:|.:.:|....:|..:.||   :|.|.||    :|...|.:......::
 Worm   594 NNLTLDKLLLHIDASRKRIAELELSSKESENRSSE---ELEEQRLYYVSMIEDLERKASDEYAAL 655

  Fly   675 REAENKK----RTLEEQIDSLREECAKLKAAEHVSAVNAEEKQRAEELRSMFD-----SQM---- 726
            ||..|:|    ..|:.|:|.|:...|.:|      .:||:...:|..:||:.|     |||    
 Worm   656 REELNQKTLSSNLLQVQVDELQLSNATIK------KLNADLSTKAGLIRSLEDSIEKKSQMITRL 714

  Fly   727 --------------------DELREAHTRQVSELRDEIAAKQHEM-DEMKDVHQ-----KLLLAH 765
                                ..|.....|::||  :..:|.|.:: |..||:.|     ||.:..
 Worm   715 EEQAVLDSSELSSTKRQLEHSRLEAIQWRKISE--ETTSAMQTQLKDHQKDIDQCRHKKKLEIQS 777

  Fly   766 QQMTADYEKVRQEDAE----------------KSSELQNIILTNERREQARKDLKGLEDTVAKEL 814
            .|::.|....|.:::|                |.||::|..     :|:....||..|||:.:: 
 Worm   778 MQLSLDNANARVKESEAMMKKLQNDEKQKFDMKMSEIENTF-----KEKLSVSLKKQEDTIRRQ- 836

  Fly   815 QTLHNLRKLFVQDLQQRIRKNVVNEESEEDGGSLAQKQKISFLENNLDQLTKVHKQLVRD----N 875
            ....|..||.|.:.:.|:                        |...::.|...|.|   |    |
 Worm   837 SLAENQGKLEVMENKNRV------------------------LSETIESLQSQHSQ---DTEVIN 874

  Fly   876 ADLRCELPKLEKRLRCTMERVKALETALKEAKEGAMRDRKRYQYEVDRIKEAVRQKHLGRRGPQA 940
            |.||....::....:..:|: ||||..:.:.:.           |.|::|:.:|.:...:...::
 Worm   875 AGLRTRGDRVGYVDKLRVEK-KALEETISQLRS-----------ENDKLKKIMRGESANKPVLRS 927

  Fly   941 QIAKP 945
            |..||
 Worm   928 QTTKP 932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 131/335 (39%)
Smc <341..>807 CDD:440809 106/557 (19%)
Khc_CBD_cc 856..925 CDD:467880 16/72 (22%)
klp-18NP_501093.1 KISc 5..328 CDD:276812 131/333 (39%)
SMC_prok_B <448..>716 CDD:274008 66/326 (20%)
SMC_N 543..>917 CDD:481474 93/443 (21%)

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