DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc and Kif3c

DIOPT Version :10

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_032471.2 Gene:Kif3c / 16570 MGIID:107979 Length:796 Species:Mus musculus


Alignment Length:124 Identity:24/124 - (19%)
Similarity:48/124 - (38%) Gaps:23/124 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DALVQKYREVDPQATKETVKRKINALRTG--YRKQLRRLNRPSRAAGSSSSSNNNSDAQRQPTWW 105
            :|:.:..:|:|....|  ::..|.|...|  |:.:|:...:........:.....|:.||:    
Mouse   630 EAVREFAKEIDVSTVK--IEEVIGAGEFGEVYKGRLKLPGKRELYVAIKTLKAGYSEKQRR---- 688

  Fly   106 YFQLFDFLD--------DYPSWLKQNGRQEQSQQAHVSQDSEVEQADDIDDSLEQQQQQ 156
                 |||.        |:|:.::..|...:|:...:.  :|..:...:|..|.|...|
Mouse   689 -----DFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIV--TEFMENGALDSFLRQNDGQ 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 24/124 (19%)
Smc <341..>807 CDD:440809
Khc_CBD_cc 856..925 CDD:467880
Kif3cNP_032471.2 KISc_KIF3 9..367 CDD:276822
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 252..292
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..422
Smc <452..>637 CDD:440809 1/6 (17%)
Globular. /evidence=ECO:0000255 633..793 23/121 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 758..796
Blue background indicates that the domain is not in the aligned region.

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