DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc and KIF3A

DIOPT Version :9

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001287720.1 Gene:KIF3A / 11127 HGNCID:6319 Length:726 Species:Homo sapiens


Alignment Length:755 Identity:244/755 - (32%)
Similarity:380/755 - (50%) Gaps:117/755 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEE--NCISI--------AGKVYLFDKVFKPNASQ 65
            |::|||.|.||||:.|:....|..|    :|:|  ..|::        ..|.:.||.||.|.:.|
Human    13 DNVKVVVRCRPLNEREKSMCYKQAV----SVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQ 73

  Fly    66 EKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAME 130
            ..|||..|:.|:..||.||||||||||||.:|||.|||||......:||||.....||.||...|
Human    74 LDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAIPELRGIIPNSFAHIFGHIAKAE 138

  Fly   131 VNLEFHIKVSYYEIYMDKIRDLLDVSKV-NLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGK 194
            .:..|.::|||.|||.:::||||...:. .|.|.|..:...|:|..:...|::.:|:..::..|.
Human   139 GDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGH 203

  Fly   195 SNRHIAVTNMNEHSSRSHSVFLINVK--QENLE-NQKKLSGKLYLVDLAGSEKVSKTGAEGTVLD 256
            .||.:..|||||||||||::|.|.::  ::.:: |.....|||:||||||||:.:||||.|..|.
Human   204 KNRSVGATNMNEHSSRSHAIFTITIECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLK 268

  Fly   257 EAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETK 321
            ||..||.|||.||||||||.||..||:|||:|||||:||:|||||::|.:.....||.:|..||.
Human   269 EATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETI 333

  Fly   322 STLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLKGKVEKLEIELARWRAGETVKAEE 386
            |||.:..|||.:||...:||: ..:...|:::||.|:   ||.|:|:.| |:    :|..:...|
Human   334 STLRYANRAKNIKNKARINED-PKDALLRQFQKEIEE---LKKKLEEGE-EI----SGSDISGSE 389

  Fly   387 QINMEDLMEASTPNLEVEAAQTAAAEAALAAQRTALANMSASVAVNEQARLATECERLYQQLD-- 449
            :.:.|          |.|..:    :.....:|...::.|:|         .:.|..:.:.||  
Human   390 EDDDE----------EGEVGE----DGEKRKKRRGSSSSSSS---------DSTCSVIEKPLDKF 431

  Fly   450 ----------DKDEEINQQSQYAEQLK--EQVMEQEELIAN-ARREYETLQSEMARIQQENESAK 501
                      ..|:.|..|::..|:.|  |..::.||...| ||.|.|..:.::.:.|||::|..
Human   432 LPNQAGKKKVSPDKMIEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLL 496

  Fly   502 EEVK-----------EVLQALEELAVNYDQKSQEIDNKNKDIDALNEELQQKQSVFNAASTELQQ 555
            |::.           ::|...||.....::.:.|::.:.|..:.|..||::|:........:...
Human   497 EKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYTS 561

  Fly   556 LKDMSSHQKKRITEMLTNL------LRDLGEVGQAIAPG------ESSIDLKMSAL-----AGTD 603
            |::.:..:.|::.::.|.|      :.||.:..|....|      :.|.:|::..|     ...|
Human   562 LQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPRD 626

  Fly   604 ASKVEEDFTMARLFISKMKTEAKNIAQRCSNMETQQADSNKKISE-YEKDLGEYRLLISQHEARM 667
            ..::.|::......|.:.  :.|.:|...:||..|....:||..: :|.||....|..::     
Human   627 YQEMIENYVHWNEDIGEW--QLKCVAYTGNNMRKQTPVPDKKEKDPFEVDLSHVYLAYTE----- 684

  Fly   668 KSLQESMREAE--------------NKKRTL--EEQIDSL 691
            :||::|:.:.|              .:||:.  |..||||
Human   685 ESLRQSLMKLERPRTSKGKARPKTGRRKRSAKPETVIDSL 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 156/335 (47%)
KISc 12..340 CDD:214526 157/341 (46%)
Apolipoprotein 595..744 CDD:279749 26/119 (22%)
KIF3ANP_001287720.1 KISc_KIF3 13..345 CDD:276822 156/335 (47%)
SMC_prok_B <450..>616 CDD:274008 35/165 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.