DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc and kif3b

DIOPT Version :10

Sequence 1:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001093615.1 Gene:kif3b / 100101641 ZFINID:ZDB-GENE-050119-3 Length:775 Species:Danio rerio


Alignment Length:805 Identity:260/805 - (32%)
Similarity:396/805 - (49%) Gaps:133/805 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAG----------KVYLFDKVFKPNA 63
            :.:|:|||.|.||:|:.|..|....||..  :|:...:::..          ||:.||.|:..|:
Zfish     6 SSESVKVVVRCRPMNEKERVANFNRVVSV--DVKLGQVAVCNPRGASSHEHPKVFTFDSVYDWNS 68

  Fly    64 SQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYA 128
            .|.::|:|..:.:|..||.|:||||||||||.:|||:|||||..|..::|:||.....||.||..
Zfish    69 KQMELYDETFRPLVDSVLFGFNGTIFAYGQTGTGKTYTMEGVRNDPERRGVIPNSFEHIFTHISC 133

  Fly   129 MEVNLEFHIKVSYYEIYMDKIRDLLDVSKV-NLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEE 192
            .: |.::.::.||.|||.::|||||...:. .|.:.|..:...|||..:.....|..::..|:..
Zfish   134 SQ-NQQYLVRASYLEIYQEEIRDLLSKDQARRLELKERPDTGVYVKDLSSFVTKSVREIEHVMNV 197

  Fly   193 GKSNRHIAVTNMNEHSSRSHSVFLINVKQENL----ENQKKLSGKLYLVDLAGSEKVSKTGAEGT 253
            |..||.:..|||||||||||::|:|.::...|    ||..:: |||.||||||||:.:||||:|.
Zfish   198 GNQNRSVGATNMNEHSSRSHAIFVITIECSELGPDGENHIRV-GKLNLVDLAGSERQTKTGAQGE 261

  Fly   254 VLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNES 318
            .|.||..||.||||||||||||.||..||||||||||||:||:||||||||.:|....|||:|..
Zfish   262 RLKEATKINLSLSALGNVISALVDGRSTHIPYRDSKLTRLLQDSLGGNARTVMVANIGPASYNVE 326

  Fly   319 ETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLKGKVEK----LEIELARWRAG 379
            ||.:||.:..|||.:||...|||: ..:...|.::   |:.||||.::||    ......|.|.|
Zfish   327 ETLTTLRYANRAKNIKNKPRVNED-PKDALLREFQ---EEIARLKEQLEKRSGRKRRRRRRRRVG 387

  Fly   380 ETVKAEEQINMEDLMEASTPNLEVEAAQTAAAEAA---------LAAQRTALANMSASVAVNEQA 435
            |  ..||..:.||..:....:.:.|....|....|         |..:|.|:        :.:.:
Zfish   388 E--GGEEFEDGEDEEDDDDDDEDEEEGVDADKNIADYWHEQQEKLEKERRAI--------MEDHS 442

  Fly   436 RLATECERLYQQLDDKDEEINQQSQYAEQL--KEQVMEQEELIA------NARREYETLQSEMAR 492
            .:|.|.:||.::.:.|..:::::.:.:|.|  |.:.||.:.|:.      :...:.:.|:.:   
Zfish   443 LVAEEKQRLLKEKERKMTDLHKEKEASEMLTAKVKAMESKLLVGGKNIVDHTNEQQKVLELK--- 504

  Fly   493 IQQENESAKEEVKEVLQALE-------ELAVNYDQKSQEIDNKNKDIDALNEELQQKQSVFNAAS 550
             :||....|...:|:.|.:|       ||...|....||:|.|.|.:..|..:||..:|      
Zfish   505 -RQEIAEQKRREREMKQEMECRDEETLELKETYSSLQQEVDIKTKKLKKLFSKLQSVKS------ 562

  Fly   551 TELQQLKDMSSHQKKRITEMLTNLLRDLGEVGQAIAPGESSIDLKMSALAGTDASKVEEDFTMAR 615
             |:|..:|.....::.:.:....|.|:| ::...|.  |:.|.::......|.|:..|||.....
Zfish   563 -EIQDAQDEHVKYRQELEQTQNELTREL-KLKHLII--ENFIPMEEKNKIVTRATFDEEDDLWKM 623

  Fly   616 LFISKMKTEAKNIAQRCSNMETQQADSNKKISEYEKDLGEYRLLISQHEARMKSLQESMR----- 675
            ..|::::                  :|:.::.:.......||..:||| |||..|   ||     
Zfish   624 TPITRIQ------------------NSDHQMMKRPVSAVGYRRPLSQH-ARMAML---MRPDVRY 666

  Fly   676 EAEN--------KKRTLEEQ-------------IDSLREE----------CAKLKAAEHVSAVNA 709
            :|||        ..||.::.             .|:||||          .|.|.::..:||..|
Zfish   667 KAENILLLELDLPSRTTKDYEGPVIAPKVAAALEDALREEDEIQVDASGFHASLGSSPGLSASAA 731

  Fly   710 EEKQRAEELRSMFDSQMDELREAHT 734
            ...::.:..|.....::.....||:
Zfish   732 GFSKKPKSGRPKTGKKVSTPTSAHS 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 158/337 (47%)
Smc <341..>807 CDD:440809 98/458 (21%)
Khc_CBD_cc 856..925 CDD:467880
kif3bNP_001093615.1 KISc_KIF3 15..341 CDD:276822 154/329 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..419 11/48 (23%)
Mplasa_alph_rch <425..>611 CDD:275316 42/207 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 716..775 8/41 (20%)
Blue background indicates that the domain is not in the aligned region.

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