DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and Cnga1

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_445949.2 Gene:Cnga1 / 85259 RGDID:621815 Length:683 Species:Rattus norvegicus


Alignment Length:671 Identity:308/671 - (45%)
Similarity:418/671 - (62%) Gaps:51/671 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 IHRQPGGGAEQDEDEEEDDDDVDEDDDDEFGASVCEDNPEEAIARAD----HDTQQKQHYQPNAS 187
            |.|...|......|  .|:..:.|:.::           |:::.|::    ....|::||.|...
  Rat    27 IRRMENGACSSFSD--NDNGSLSEESEN-----------EDSLFRSNSYRRRGPSQREHYLPGTM 78

  Fly   188 DSSYVENGRKLIQEPSKRSKPSALRRTLQALRQRLTKRNRPKPPDWFLEKFSNTTNTDKIGKGCP 252
            ....|.|.....|:|.::.|....:::     :...|:...|.|:   :|.......:|..:..|
  Rat    79 ALFNVNNSSNKDQDPKEKKKKKKEKKS-----KADDKKESKKDPE---KKKKKEKEKEKKKEEKP 135

  Fly   253 AMEDAALSSEIRGSSVLCNRLSVDPTLQSHYRWLAIVSLAVLYNIIFVVGRAVFWEINKSAPAFW 317
            ..:......|:         :.:||:...:|.||..::|.|:||...::.||.|.|:......:|
  Rat   136 KEKKEEEKKEV---------VVIDPSGNMYYNWLFCITLPVMYNWTMIIARACFDELQSDYLEYW 191

  Fly   318 YTLDYLCDFIYLLDTLVHMHEGFLDQGLLVRDAFRLRRHYFHTKGWYLDVLSMLPTDLAYI---W 379
            ...||:.|.:||.|..|....|:|:|||||:|..:|...|.....:.|||||::||||.|.   |
  Rat   192 LIFDYVSDVVYLADMFVRTRTGYLEQGLLVKDKLKLIEKYKANLQFKLDVLSVIPTDLLYFKFGW 256

  Fly   380 WPPETCSSLYLPCPVIVRLNRLLRINRLWEWFDRTETATGYPNAFRICKVVLAILVLIHWNACMY 444
            ..||            :||||||||:|::|:|.||||.|.|||.|||..:|:.|:::||||||:|
  Rat   257 NYPE------------IRLNRLLRISRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVY 309

  Fly   445 FAISYEIGFSSDSWVY-NLNGTRNNTLQRQYIYSFYWSTLTLTTIGETPTPENDVEYLFVVADFL 508
            ::||..|||.:|:||| ::|......|.|:|:||.||||||||||||||.|..|.||:|||.|||
  Rat   310 YSISKAIGFGNDTWVYPDVNDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVLDSEYVFVVVDFL 374

  Fly   509 AGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGAL 573
            .||||||||||||||||||||.||.|||:|:|.:||||.||.|..::|.|||:||.|.|:....:
  Rat   375 IGVLIFATIVGNIGSMISNMNAARAEFQSRVDAIKQYMNFRNVSKDMEKRVIKWFDYLWTNKKTV 439

  Fly   574 DEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVG 638
            ||..||..|||||:|||||.||:||||:||||.|.|.|||..|||||:.||:|||||||:|||:|
  Rat   440 DEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIG 504

  Fly   639 KEMYIVKRGKLSVVGDDGITVLATLGAGSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFCLAK 703
            :||||:|.|||:||.|||||....|..||.|||:|:|.|.|::.|||||||::|:||||||||:|
  Rat   505 REMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSK 569

  Fly   704 RDLWETLSDYPEARSTLTQRGCQLLRKDGLLDEQIFADSQRVHDSIEGGIEKLELSVENLNMRLA 768
            .||.|.|::||:|::.|.::|.|:|.||||||..| |:.......:|..:.::|.||:.|..|.|
  Rat   570 DDLMEALTEYPDAKTMLEEKGRQILMKDGLLDINI-ANLGSDPKDLEEKVTRMEGSVDLLQTRFA 633

  Fly   769 RLLAEYTASQAKIKQRLAKLE 789
            |:||||.:.|.|:||||.|:|
  Rat   634 RILAEYESMQQKLKQRLTKVE 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 130/250 (52%)
CAP_ED 604..717 CDD:237999 73/112 (65%)
CLZ 720..790 CDD:465160 32/70 (46%)
Cnga1NP_445949.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..144 20/130 (15%)
Ion_trans 156..398 CDD:459842 132/253 (52%)
Ion conduction pathway. /evidence=ECO:0000250|UniProtKB:P29973 286..394 70/107 (65%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P29973 353..356 2/2 (100%)
C-linker. /evidence=ECO:0000250|UniProtKB:P29973 396..472 45/75 (60%)
CAP_ED 470..586 CDD:237999 74/115 (64%)
Cyclic nucleotide-binding domain. /evidence=ECO:0000250|UniProtKB:P29973 476..596 74/119 (62%)
CLZ 586..655 CDD:465160 32/70 (46%)

Return to query results.
Submit another query.